Pairwise Alignments

Query, 609 a.a., Peptide ABC transporter, periplamic peptide-binding protein from Pseudomonas putida KT2440

Subject, 609 a.a., ABC-type oligopeptide transport system, periplasmic component from Pseudomonas stutzeri RCH2

 Score =  949 bits (2454), Expect = 0.0
 Identities = 449/605 (74%), Positives = 519/605 (85%)

Query: 5   LLLSLSLALSFPAAAIVSESHGYAQFGTLKYPATFTHFDWVNPQAPKGGTLRAMAFGTFD 64
           LLL   LALSFPA A +SESHGYAQFGTLKYPA+FTHFDWVNP+APKGG ++ MA GTFD
Sbjct: 5   LLLLTCLALSFPALATISESHGYAQFGTLKYPASFTHFDWVNPRAPKGGRIKLMASGTFD 64

Query: 65  TLNPYTFKGSSPITTPNFQQYGISELNEPLMVGTGQYDPSGDEPTSSYGLIARSVEYSED 124
           TLNPYTFKG+SP  TP F QYGISELNEPLMVGTG YDPSGDEP SSYGLIA SVEYS++
Sbjct: 65  TLNPYTFKGTSPSATPGFLQYGISELNEPLMVGTGIYDPSGDEPASSYGLIAESVEYSDN 124

Query: 125 RSWVVFNLRPEARWHDGQPITSADVAFSYRTLLKDGHPIYRTNLQEVQRVDILGPLRIRF 184
            SWVVFNLR +AR+HDG+PIT+ DVAFSYR L+KDGHP YRTNLQ V+RVDIL   RIRF
Sbjct: 125 NSWVVFNLRKQARFHDGKPITAYDVAFSYRLLVKDGHPQYRTNLQGVKRVDILNRHRIRF 184

Query: 185 VFKRAGNPLLILRLGEMPVLPKHYWQKRDFKATTFEPPLGSGPYRITQVQPGRRLVFERV 244
           VF++  NPLL++RLGE+PVLP+HYW+ RDFKATTFEPPLGSGPYRIT VQPGR++VFERV
Sbjct: 185 VFEQPDNPLLVMRLGELPVLPQHYWKNRDFKATTFEPPLGSGPYRITHVQPGRQVVFERV 244

Query: 245 KNYWGKDLAVNRGKYNFNRVEYEFYRDATVAFEAFKAGEFDIYIEHQAKNWANGYNFPAV 304
           +N+WG  L VN+GKYNFNRV+ EFYRD+ VAFEAFK  EFD YIEHQAKNWANGY FPA+
Sbjct: 245 RNWWGAKLPVNQGKYNFNRVDVEFYRDSVVAFEAFKVAEFDFYIEHQAKNWANGYEFPAM 304

Query: 305 RRGEVIKAQIPHSIPTQTQGLFMNSRRAAFSDPRVRQALGLMLDFEWTNRALFSSAYRRS 364
            RG++I+A+IPH IPTQTQ LFMNSRRA F+D RVR+ALGLM DFEWTNRALF  AYRRS
Sbjct: 305 LRGDIIRAEIPHQIPTQTQALFMNSRRATFADQRVREALGLMFDFEWTNRALFYGAYRRS 364

Query: 365 TSYYPNSEFAASGLPTGKEWLLLAPFRDQLPAKLFSEPYKVSHTDGRGISRQTLRQALGL 424
            SYYPNS+F A+G P G EWLLL+P+R QLPAKLF+EP+++  TDGRGI R+TLR+ALGL
Sbjct: 365 ESYYPNSDFTATGKPEGGEWLLLSPYRKQLPAKLFTEPFELPRTDGRGIPRETLRRALGL 424

Query: 425 LAEAGWKLHGQRLVDSKGQQLRMELLLVNPNLERILQPYVENLSSIGIDARLRTVDRAQY 484
           LAEAGWK     L++  GQ LR E+LLVNP LER+LQPYVENL+ IGI A LRTVD AQY
Sbjct: 425 LAEAGWKASDAGLLNGAGQPLRFEILLVNPRLERVLQPYVENLARIGIQANLRTVDSAQY 484

Query: 485 KQRLDQFDFDMILMTLNQTLSPGLEQWLYFHSSQAATKGSKNYAGVKDPVVDHLLDTLLA 544
           KQRLD +D+DMILMTL Q+LSPG+EQ LYFHSSQ   KG +NYAGV +P++D L+  LLA
Sbjct: 485 KQRLDHYDYDMILMTLVQSLSPGIEQHLYFHSSQVDVKGGRNYAGVANPIIDDLIAKLLA 544

Query: 545 ARTRDDQVAAARALDRVLSWHYYMIPNWYLDNHRLAYRNRFAFVTTPPYTLGLNSWWIKT 604
           A+TRD+QVAAARA+DRVL W++Y IPNW++ NHRLAYRNRFA VTTPPYTLGL +WW+K+
Sbjct: 545 AQTRDEQVAAARAIDRVLLWNHYTIPNWFISNHRLAYRNRFAHVTTPPYTLGLRAWWLKS 604

Query: 605 SEKAQ 609
            EK +
Sbjct: 605 LEKTK 609