Pairwise Alignments

Query, 609 a.a., Peptide ABC transporter, periplamic peptide-binding protein from Pseudomonas putida KT2440

Subject, 604 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  427 bits (1097), Expect = e-124
 Identities = 237/599 (39%), Positives = 334/599 (55%), Gaps = 10/599 (1%)

Query: 6   LLSLSLALSFPAAAIVSESHGYAQFGTLKYPATFTHFDWVNPQAPKGGTLRAMAFGTFDT 65
           L+ L  A SF   A+ +  H  A  G    PA F HF +VNPQ  KGG +     GTFD+
Sbjct: 8   LVMLLAASSFATGALAAPVHAIAMHGDPALPADFKHFPYVNPQVKKGGKIAYGVVGTFDS 67

Query: 66  LNPYTFKGSSPITTPNFQQYGISEL-NEPLMVGTGQYDPSGDEPTSSYGLIARSVEYSED 124
           LNP+  K S   T       G   L  E LM        S DEP + YGL+A +VE+ +D
Sbjct: 68  LNPFILK-SMRTTARGMWDPGFGNLVYESLM------QRSQDEPFTMYGLLAETVEWDDD 120

Query: 125 RSWVVFNLRPEARWHDGQPITSADVAFSYRTLLKDGHPIYRTNLQEVQRVDILGPLRIRF 184
           R+++ FNL P+ARW DG+P+T+ DV F++  L   G   +   L +V +++ +G   +RF
Sbjct: 121 RTFIQFNLNPKARWADGRPVTAEDVIFTFELLRDKGRAPFSNRLSKVAKMEKVGERSVRF 180

Query: 185 VFKRAGNPLLILRLGEMPVLPKHYWQKRDFKATTFEPPLGSGPYRITQVQPGRRLVFERV 244
            F    +  + L LG  PVLPKH      F  T+ EPPLGSGPYR+ +V+PG R+V+ R 
Sbjct: 181 TFTEEADREIPLLLGLSPVLPKHAINVETFDRTSLEPPLGSGPYRVAEVRPGERIVYRRN 240

Query: 245 KNYWGKDLAVNRGKYNFNRVEYEFYRDATVAFEAFKAGEFDIYIEHQAKNWANGYNFPAV 304
            +YW KDL    G  N++ +  E++      FEAFK G  DIY E  A  WA  Y+FPAV
Sbjct: 241 PDYWAKDLPSKVGLDNYDEISVEYFLQENTLFEAFKKGVVDIYAEGSATKWARAYDFPAV 300

Query: 305 RRGEVIKAQIPHSIPTQTQGLFMNSRRAAFSDPRVRQALGLMLDFEWTNRALFSSAYRRS 364
           R G VIK       P+   G   N+RR  F + ++RQ L L+ DFEW N+ LF  AY R+
Sbjct: 301 RSGNVIKETFKPKTPSGMLGFVFNTRRPMFDNIKLRQGLALVFDFEWVNKNLFDGAYTRT 360

Query: 365 TSYYPNSEFAASGLPT-GKEWLLLAPFRDQLPAKLFSEPYKVSHTDGRGISRQTLRQALG 423
            SY+ NS  +  G+    +E  L+   R+++   +    Y++  TDG G  R  LR+A+ 
Sbjct: 361 QSYWQNSSLSFLGVAADNRELDLMGDVRERINPAILDGSYRLPVTDGSGRDRNVLREAVT 420

Query: 424 LLAEAGWKLHGQRLVDSKGQQLRMELLLVNPNLERILQPYVENLSSIGIDARLRTVDRAQ 483
           LL EAG+ +   ++VD+KG  L  E++  N   E++   Y   L+ +GI AR+RTVD +Q
Sbjct: 421 LLREAGYSIKDGKMVDAKGTPLAFEIMSQNAGQEKVALAYQRFLAPLGIAARVRTVDDSQ 480

Query: 484 YKQRLDQFDFDMILMTLNQTLSPGLEQWLYFHSSQAATKGSKNYAGVKDPVVDHLLDTLL 543
           Y+ R   FD+D+I+ +   +LSPGLEQ   + S     +GS N+AGV D  VD L++ +L
Sbjct: 481 YQLRSQSFDYDVIIKSFPSSLSPGLEQINRWSSQTRDRQGSDNFAGVADKDVDKLINNIL 540

Query: 544 AARTRDDQVAAARALDRVLSWHYYMIPNWYLDNHRLAYRNRFAFVTTPP-YTLGLNSWW 601
            AR  +D  AA RA DR+L  + Y++P ++LD   +A        TT P Y   L SWW
Sbjct: 541 QARNPEDFTAAVRAHDRLLVNNSYLVPLYHLDAQWIARWKHIGRPTTVPLYGYQLPSWW 599