Pairwise Alignments

Query, 609 a.a., Peptide ABC transporter, periplamic peptide-binding protein from Pseudomonas putida KT2440

Subject, 543 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score = 87.4 bits (215), Expect = 1e-21
 Identities = 104/443 (23%), Positives = 171/443 (38%), Gaps = 52/443 (11%)

Query: 104 SGDEPTSSYGLIARSVEYSEDRSWVVFNLRPEARWHDGQPITSADVAFSYRTLLKDGHPI 163
           S D+  +   L+A     SED     F LR + RWHDG+  T+  VAFS    LK+ HP 
Sbjct: 82  SYDKDFNPQPLLATEWTVSEDGLRYWFKLRQDVRWHDGRDFTAEAVAFSI-LALKENHPR 140

Query: 164 YRTNLQEVQRVDILGPLRIRFVFKRAGNPLLILRLG--EMPVLPKHYWQKRDFKATTFE- 220
            R     V+  ++L    +     +   P L+      E P++PKH ++           
Sbjct: 141 GRATFAHVKEANVLNSHEVELTLAKPA-PYLLTAFASFEAPIVPKHLYEGTKIAENPHNV 199

Query: 221 PPLGSGPYRITQVQPGRRLVFERVKNYWGKDLAVNRGKYNFNRVEYEFYRDATVAFEAFK 280
            P+G+GPY+  +   G   +F R ++YWG        K   +++ + F  D   A  A +
Sbjct: 200 APVGTGPYKFVEWVRGSHALFVRNEDYWGSP------KPYLDQIIFRFIVDPAAAVAAIE 253

Query: 281 AGEFDIYIEHQAKNWANGYNFPAVRRGEVIKAQIPHSIPTQTQGLFMNSRRAAFSDPRVR 340
            GE                        +V  A +P    T    L  N      +DP   
Sbjct: 254 TGEV-----------------------QVSTANLP---LTDIDRLKANPNLVVDTDPAPY 287

Query: 341 QALGLMLDFEWTNRALFSSAYRRSTSYYPNSEFAASGLPTGKEWLLLAPFRDQLPAKLFS 400
                  +F   N+ L     R + ++  + +F  + +  G    L  P    L AK +S
Sbjct: 288 SPSIARAEFNLENKYLADIKVRHAIAHAVDKDFIVNTVYLGYATRLDGPVSPDL-AKFYS 346

Query: 401 EPYKVSHTDGRGISRQTLRQALGLLAEAGWKLHGQRLVDSKGQQLRMELLLVNPNLERIL 460
                   D     +        LL EAG+     R  D    +L ++    +   ++  
Sbjct: 347 PDLPKYEFDPAKSEK--------LLDEAGY----ARGADGFRFKLFIDPTQPSGPPKQTA 394

Query: 461 QPYVENLSSIGIDARLRTVDRAQYKQRL-DQFDFDMILMTLNQTLSPGL-EQWLYFHSSQ 518
           +   + L+ +GI   LRT D A + +R+    DFD+ +  ++    P +  Q LY+  + 
Sbjct: 395 EYIAQALAKVGIKVELRTQDFATFVKRVFTDRDFDIAIEGMSNLYDPTVGVQRLYWSKNF 454

Query: 519 AATKGSKNYAGVKDPVVDHLLDT 541
                  N +   +P VD LL+T
Sbjct: 455 KPGVPFTNGSKYSNPEVDRLLET 477