Pairwise Alignments

Query, 476 a.a., Membrane-bound lytic murein transglycosylase D from Pseudomonas putida KT2440

Subject, 532 a.a., lytic transglycosylase from Vibrio cholerae E7946 ATCC 55056

 Score =  298 bits (762), Expect = 4e-85
 Identities = 175/483 (36%), Positives = 266/483 (55%), Gaps = 59/483 (12%)

Query: 25  LAATLVGCQSTRQLDESDS----VRAHNYQARIKHKPSP------------------LLV 62
           LA  LVGCQS + +D + S    V      A +K K  P                  + +
Sbjct: 9   LALLLVGCQSPQPVDTTTSDDQAVNPPTQSATVKKKRKPQTTATLPAGETESVEEERVAL 68

Query: 63  KPAEQAPQDVWERMRQGFALQDSIDVNPRIEQQRLWFASNPTFIESAGERGSLYLHYIVE 122
            P EQ   DVW+R+   F L   I  +P ++ QR WF  NP  +++   R   +L+ I E
Sbjct: 69  TPQEQ--DDVWQRIAMQFKL--GIPKDPSVDAQREWFLKNPGHLQAIASRAEPFLYLITE 124

Query: 123 RLEERDMPLELALLPAIESAYNPMAYSRASAAGMWQFMPATGRHFNLRQTNFYDGRRDVT 182
           ++E+R +PLEL LLP +ES+++P AYS  SAAG+WQF+ +TG+ + L+Q  +YDGRRDV 
Sbjct: 125 KVEQRGLPLELVLLPIVESSFDPFAYSHGSAAGLWQFISSTGKRYGLKQNFWYDGRRDVA 184

Query: 183 ASTNAALDYLTRLHDMFNGDWLLALAAYNAGEGTVSRAIERNERLGLPTDYWNLPLPQET 242
           A+T+AALDYLT L+  F+GDW  A+AAYN+GEG V+RAI+ N++ G P D+++L LP+ET
Sbjct: 185 AATDAALDYLTVLNQHFDGDWYHAIAAYNSGEGRVARAIKANKKAGKPIDFFSLDLPKET 244

Query: 243 RDYVPKLLALSQVVSTPEAYGVNLTPIANEPYFEAVAINDRLDLSRVAAFANIDEDELIQ 302
             YVPKL+AL+ V++  E YG+++  I N P    V   ++LDL+  A +A +   EL  
Sbjct: 245 SGYVPKLIALADVIANQEKYGISIPAIENRPVLATVDPKEQLDLAIAARYAGLTVKELQS 304

Query: 303 LNPAFKKRMTV-DGPKQLLVPTAKAQLLSASLSNLNPEQLVSLQPPKAAFARAVAEAKAP 361
            NPA+ +  T  +GP QLL+P  K +  + ++     + +  ++                
Sbjct: 305 FNPAYNQWATAPNGPHQLLIPVEKVERFNLAMEENRGKGIKVVR---------------- 348

Query: 362 VGARSYRVKRGDNLSAIAKANRVSVKDIKRWNRLSGNSLRAGQVLALRGGSAPSAA---- 417
                Y+VK GD LS IA     + K IK  N+++ N +R G  L +        A    
Sbjct: 349 -----YKVKSGDTLSTIADKYNTTAKVIKEANQIASNQIRVGSYLFVPTSVKDEKAYALS 403

Query: 418 -GNRVAAS-----GKRSTQYKVRKGDSLYLVAKRFNVEMKHLKRWNPRS-GHALKPGQTL 470
             NR+A +     G+    + V  G+SL+ +AK++NV  + L +WN  +   AL+ GQ L
Sbjct: 404 VSNRLAKTQSVPRGQYQLTHTVNSGESLWTIAKQYNVPYQSLAKWNGMAPKDALRKGQKL 463

Query: 471 TVY 473
            ++
Sbjct: 464 VIW 466



 Score = 55.5 bits (132), Expect = 4e-12
 Identities = 36/111 (32%), Positives = 58/111 (52%), Gaps = 9/111 (8%)

Query: 366 SYRVKRGDNLSAIAKANRVSVKDIKRWNRLSG-NSLRAGQVLALRGGSAPSAAGNRVAAS 424
           ++ V  G++L  IAK   V  + + +WN ++  ++LR GQ L +   S P++   R    
Sbjct: 422 THTVNSGESLWTIAKQYNVPYQSLAKWNGMAPKDALRKGQKLVIWKDSKPTSGVIRTVT- 480

Query: 425 GKRSTQYKVRKGDSLYLVAKRFNVEMKHLKRWNP-RSGHALKPGQTLTVYL 474
                 YKVR GD+L  +A +F V+   + +WN   S   LK GQ L +Y+
Sbjct: 481 ------YKVRSGDTLSGIANKFKVKTADIVKWNDLNSTQYLKAGQQLKLYV 525