Pairwise Alignments

Query, 476 a.a., Membrane-bound lytic murein transglycosylase D from Pseudomonas putida KT2440

Subject, 566 a.a., membrane-bound lytic murein transglycosylase D precursor from Marinobacter adhaerens HP15

 Score =  323 bits (829), Expect = 7e-93
 Identities = 176/421 (41%), Positives = 254/421 (60%), Gaps = 33/421 (7%)

Query: 65  AEQAPQDVWERMRQGFALQDSIDVNPRIEQQRLWFASNPTFIESAGERGSLYLHYIVERL 124
           AE   QD+W R+R GF L   ID N R+  Q  W+A +P +I+   ERGS YLHYIV   
Sbjct: 92  AEAVEQDLWARLRSGFVLDHDID-NERVRDQLNWYARHPGYIDRVVERGSRYLHYIVNET 150

Query: 125 EERDMPLELALLPAIESAYNPMAYSRASAAGMWQFMPATGRHFNLRQTNFYDGRRDVTAS 184
           E+R +P E ALLP +ESA++P AYS   AAG+WQF+P+TG++F L Q+ ++D RRDV A+
Sbjct: 151 EKRGLPAEYALLPVVESAFDPFAYSHGRAAGLWQFIPSTGKYFGLTQSWWHDDRRDVIAA 210

Query: 185 TNAALDYLTRLHDMFNGDWLLALAAYNAGEGTVSRAIERNERLGLPTDYWNLPLPQETRD 244
           T+AAL YL RL + F+GD  LALAAYN+G GTVS A+ RN     PTD+W+L LP+ETR 
Sbjct: 211 TDAALTYLERLANRFDGDHTLALAAYNSGGGTVSSAMRRNRNANKPTDFWSLHLPRETRH 270

Query: 245 YVPKLLALSQVVSTPEAYGVNLTPIANEPYFEAVAINDRLDLSRVAAFANIDEDELIQLN 304
           YVPKL+AL+++   PEAYG+ L  + +EPYFE V    +LDL++ A  A +D DE+  LN
Sbjct: 271 YVPKLIALAKIFDDPEAYGIELPSLKDEPYFEVVDTGSQLDLAQAAELAGVDVDEIYLLN 330

Query: 305 PAFKKRMT-VDGPKQLLVPTAKAQLLSASLSNLNPEQLVSLQPPKAAFARAVAEAKAPVG 363
           P++ +  T  DGP +LLVP   A+   A+L+ +   Q VS                    
Sbjct: 331 PSYNRWATSPDGPHRLLVPVGNAETFRAALAEIPANQRVSW------------------- 371

Query: 364 ARSYRVKRGDNLSAIAKANRVSVKDIKRWNRLSGNSLRAGQVLALRGGSAPS-----AAG 418
            R+Y+VK GD+L++I++    +   +++ N L  + +R GQ L +   S  S     +A 
Sbjct: 372 -RNYKVKSGDSLNSISRKFSTTPSVLQQVNNLDSDLIRIGQRLMIPSASKGSDAYALSAS 430

Query: 419 NRVAASGKR-----STQYKVRKGDSLYLVAKRFNVEMKHLKRWNPRS-GHALKPGQTLTV 472
            R+    +R       +Y VRKGD+ + +A+   V ++ +  WN  + G  L PG+ L +
Sbjct: 431 QRLERKQERKRDGNKVRYTVRKGDTFWDIAREHRVSVREVAAWNGMAPGDPLIPGKELVI 490

Query: 473 Y 473
           +
Sbjct: 491 W 491



 Score = 39.7 bits (91), Expect = 3e-07
 Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 1/51 (1%)

Query: 359 KAPVGARSYRVKRGDNLSAIAKANRVSVKDIKRWNRL-SGNSLRAGQVLAL 408
           KA V    YRV++GD+L+ IA    V+V+DI  WN L +   L+ GQ L L
Sbjct: 508 KAMVRKVGYRVRKGDSLARIASRFSVNVRDIASWNDLNTARYLQPGQSLVL 558