Pairwise Alignments

Query, 148 a.a., ribonuclease H from Pseudomonas putida KT2440

Subject, 259 a.a., RNase HI from Synechococcus elongatus PCC 7942

 Score =  153 bits (386), Expect = 2e-42
 Identities = 76/142 (53%), Positives = 98/142 (69%), Gaps = 6/142 (4%)

Query: 1   MSDSV-EMFTDGACKGNPGPGGWGV-LMIYKGVEKELWGGERETTNNRMELMAAIQGLMS 58
           MSD++  ++TDGAC GNPGPGGWGV +    G  +EL G +  TTNNRMEL AAI  L  
Sbjct: 1   MSDAILRLYTDGACTGNPGPGGWGVQIQFADGTVQELGGRDAATTNNRMELQAAIAALEF 60

Query: 59  LKRECE---VVLTTDSQYVMKGINEWMVNWKKRGWKTAAKEPVKNADLWQQLDEQVNRHK 115
            +   +   V L TDS+YV+KGI +W+  W+++GWKTAA +PV N DLW  LD+ +N   
Sbjct: 61  WRDHSDQQPVTLYTDSEYVIKGITQWLKGWQRKGWKTAAGKPVLNQDLWMHLDD-LNSPA 119

Query: 116 VTWKWVRGHIGHPGNERADQLA 137
           V W++VRGH G PGNER DQ+A
Sbjct: 120 VQWQYVRGHSGDPGNERCDQIA 141