Pairwise Alignments

Query, 148 a.a., ribonuclease H from Pseudomonas putida KT2440

Subject, 158 a.a., ribonuclease HI (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  172 bits (436), Expect = 2e-48
 Identities = 73/138 (52%), Positives = 100/138 (72%)

Query: 5   VEMFTDGACKGNPGPGGWGVLMIYKGVEKELWGGERETTNNRMELMAAIQGLMSLKRECE 64
           + +FTDG+C GNPGPGG+G++M YKG  KE+  G   TTNNRMEL+A I  L +LK  C+
Sbjct: 7   IHIFTDGSCLGNPGPGGYGIVMNYKGHTKEMSDGFSLTTNNRMELLAPIVALEALKEPCK 66

Query: 65  VVLTTDSQYVMKGINEWMVNWKKRGWKTAAKEPVKNADLWQQLDEQVNRHKVTWKWVRGH 124
           ++LT+DSQY+ +GI  W+  WKK+GW T+ + PVKN DLW++LD+    H++ W+WV+GH
Sbjct: 67  IILTSDSQYMRQGIMTWIHGWKKKGWMTSNRTPVKNVDLWKRLDKAAQLHQIDWRWVKGH 126

Query: 125 IGHPGNERADQLANRGVD 142
            GH  NER DQLA    +
Sbjct: 127 AGHAENERCDQLARAAAE 144