Pairwise Alignments

Query, 489 a.a., NADH-quinone oxidoreductase subunit N from Pseudomonas putida KT2440

Subject, 513 a.a., proton-translocating NADH-quinone oxidoreductase, chain M from Synechococcus elongatus PCC 7942

 Score =  128 bits (322), Expect = 4e-34
 Identities = 109/383 (28%), Positives = 176/383 (45%), Gaps = 15/383 (3%)

Query: 110 YLLLLMSALGGLVLVSANHLAGLFIGLELLSVPVYGLVAYAFFNKRSLEAGIKYMVLSAA 169
           Y L+ ++A G  + + +  L    +G EL  +P+Y L++     +R   A  ++++ +A 
Sbjct: 108 YSLIFLAAAGMAIALLSRDLLLFVLGYELELIPMYLLISIWGGEQRG-PAATRFLIFTAI 166

Query: 170 GSAFLLFGM---ALLYADAGSLSFDQIGKALATTSMPSLVAQLGLGMMLVG-LAFKLSLV 225
               LL G    A+L +   S +FDQ    L T  +P L  QL L ++ V   A KL LV
Sbjct: 167 SGILLLLGAIATAVLSSQPFSFAFDQ----LQTIELP-LALQLPLLLLFVAAFAIKLPLV 221

Query: 226 PFHLWTPDVYEGAPAPVAAFLATA-SKVAVFAVVVRLFMLSPAASSGVLSTVLAVIAVAS 284
           PFH W P  Y  A   +A  L  A +K+  + +        P A S +++  LAV+A  +
Sbjct: 222 PFHSWQPAAYGQASPAIAMLLGGAIAKLGGYGLFRFGCSFFPEAWS-LIAPSLAVLAAVT 280

Query: 285 ILIGNLLALTQSNLKRLLGYSSIAHFGYLVIALVASKGLALEAMGVYLVTYVITSLGAFG 344
            L G+L AL Q++L+RL+ +SSI H G L++AL A   LAL+     +V + +     F 
Sbjct: 281 ALYGSLNALRQTDLQRLVAFSSIGHMGTLLLALAAGTPLALQGAIAQMVAHGLILALLFQ 340

Query: 345 VITLMSSPYGGRDADALYEYRGLFWRRPYLTAVLTVMMLSLAGIPLTAGFIGKFYIIATG 404
           ++  +    G RD D L          P    +L +  ++ AGIP   GF+ +F I    
Sbjct: 341 LVGTIERVTGRRDRDQLSGLLNPIRGLPLTAGLLLLAAMASAGIPGLVGFVAEFLIFQGS 400

Query: 405 VESHLWWLVGALVIGSAIGVYYYLRVMVTLYLVEPNLRRHDAPLKWEQRTGGVMLLAIAI 464
                W  VG +       VY+   +    +    N      P+   +R   V+L   A+
Sbjct: 401 FAIFPWATVGCIAASGLTAVYFVSLINRACFGKLDNQEARWRPVTVSERWPAVVL---AL 457

Query: 465 LAFVLGVYPQPLLEMVQQAGLQL 487
               LG+ PQ L+   + + L +
Sbjct: 458 TVMALGLAPQGLVRWSESSSLAI 480