Pairwise Alignments

Query, 489 a.a., NADH-quinone oxidoreductase subunit N from Pseudomonas putida KT2440

Subject, 490 a.a., NADH dehydrogenase (quinone) (NCBI) from Rhodospirillum rubrum S1H

 Score =  131 bits (330), Expect = 5e-35
 Identities = 114/399 (28%), Positives = 187/399 (46%), Gaps = 28/399 (7%)

Query: 50  LSLLPALKVAPLAVTSLITIDKFACLYMAIILVATLACVTLAHAYLGEGAKGFPGNREEL 109
           L +L  +   PL    + T+D    L+  +     +     + AYL    +         
Sbjct: 63  LVMLSVMDTIPL----VFTLDPLGLLFALVAAALWIPAGLYSIAYLRANHEAHQPRFHAY 118

Query: 110 YLLLLMSALGGLVLVSANHLAGLFIGLELLSVPVYGLVAYAFFNKRSLEAGIKYM-VLSA 168
           + L +   LG   +  A +L  LF+  E L++  Y L+ +     +++ AG  YM +L  
Sbjct: 119 FALAIACTLG---IALAGNLFTLFLFYEALTLSTYPLITHQG-TAQAVRAGRIYMGMLLV 174

Query: 169 AGSAFLLFGMALLYADAGSLSFDQIGKALATTSMPSLVAQLGLGMMLVGLAFKLSLVPFH 228
                LL  + L ++ AG + F Q G  LA      LV  L L + + G A K +L+PFH
Sbjct: 175 PSIGLLLVAIILTHSLAGRMDF-QPGGILAGRIDGPLVGLL-LALFVFGTA-KAALMPFH 231

Query: 229 LWTPDVYEGAPAPVAAFLATAS--KVAVFA---VVVRLFMLSPAASSGVLSTVLAVIAVA 283
            W P     AP PV+A L   +  K  VF    VV+ +F +   A+S      L  +A  
Sbjct: 232 RWLPAAMV-APTPVSALLHAVAVVKAGVFTIAKVVISIFGIDLLAASSWTGW-LTWVAGI 289

Query: 284 SILIGNLLALTQSNLKRLLGYSSIAHFGYLVIALVASKGLALEAMGVYLVTYVITSLGAF 343
           S+++ +L+AL Q NLKR L YS+I+   Y+V+AL     L + A G+++V +      AF
Sbjct: 290 SVILASLIALRQDNLKRRLAYSTISQLAYVVMALSLFSPLGVLAAGLHIVVH------AF 343

Query: 344 GVITLMSSP---YGGRDADALYEYRGLFWRRPYLTAVLTVMMLSLAGIPLTAGFIGKFYI 400
           G ITL  +    +     D++ ++ G+    P+      V  LS+ G+P TAGF+ K+ I
Sbjct: 344 GKITLFFAAGAIHTATHKDSVSQFAGIGRAMPWTMGAFAVASLSMIGLPPTAGFLSKWGI 403

Query: 401 IATGVESHLWWLVGALVIGSAIGVYYYLRVMVTLYLVEP 439
            +   +   W +V  L+  + +   Y+L ++ T +L  P
Sbjct: 404 FSAAFQGQTWGVVAVLIASTVLNAAYFLPILHTAFLKPP 442