Pairwise Alignments

Query, 510 a.a., NADH:ubiquinone oxidoreductase, membrane subunit M from Pseudomonas putida KT2440

Subject, 513 a.a., proton-translocating NADH-quinone oxidoreductase, chain M from Synechococcus elongatus PCC 7942

 Score =  271 bits (694), Expect = 3e-77
 Identities = 186/485 (38%), Positives = 264/485 (54%), Gaps = 30/485 (6%)

Query: 6   LILIPFIGGFLCWLGERFGATLPRWIALLTMSLLLGIGLWLWGTGDYTLAPAPGAEPAWA 65
           L++   +G  L  LG +  A + RW      ++L+  G  L G       PA  AEP  A
Sbjct: 5   LLITAILGASLLSLGSQDSAQIRRWAIAAASAILVLSGSLLMG-----FDPAV-AEPQQA 58

Query: 66  LEYKVEWIKRFGISIHLALDGLSLLMILLTGLLGVLSVLCSWKEIQRHVGFFHLNLMWIL 125
           +++  EW+   GI   L LDGLSL ++LL+ LL +L++  S  +  R   ++ L  +   
Sbjct: 59  IDW--EWLPSLGIHFSLGLDGLSLPLLLLSSLLTLLAIASSPTDQTRPRLYYSLIFLAAA 116

Query: 126 GGVVGVFLALDLFLFFFFWEMMLVPMYFLIALWGHSSADGKKTRIYAATKFFIFTQASGL 185
           G  + + L+ DL LF   +E+ L+PMY LI++WG         R  AAT+F IFT  SG+
Sbjct: 117 GMAIAL-LSRDLLLFVLGYELELIPMYLLISIWGGEQ------RGPAATRFLIFTAISGI 169

Query: 186 IMLVAILGLVLVNYNTTGVLTFNYSDLLKAELPAGIEYVLMLGFFIAFAVKLPVVPFHSW 245
           ++L   LG +     ++   +F +  L   ELP  ++  L+L F  AFA+KLP+VPFHSW
Sbjct: 170 LLL---LGAIATAVLSSQPFSFAFDQLQTIELPLALQLPLLLLFVAAFAIKLPLVPFHSW 226

Query: 246 LPDAHAQAPTAGSVDLAGILLKTAAYGLLRFALPLFPNASAEFAPIAMTLGLIGIFYGAF 305
            P A+ QA  A ++ L G + K   YGL RF    FP A +  AP    L  +   YG+ 
Sbjct: 227 QPAAYGQASPAIAMLLGGAIAKLGGYGLFRFGCSFFPEAWSLIAPSLAVLAAVTALYGSL 286

Query: 306 LAFAQTDIKRLIAFSSVSHMGFVLIGIYSGSQQALQGAVIQMLAHGLSAAALFILSGQLY 365
            A  QTD++RL+AFSS+ HMG +L+ + +G+  ALQGA+ QM+AHGL  A LF L G + 
Sbjct: 287 NALRQTDLQRLVAFSSIGHMGTLLLALAAGTPLALQGAIAQMVAHGLILALLFQLVGTIE 346

Query: 366 ERLHTRDMRQMGGLWHRIAYLP---AISLFFAAASLGLPGTGNFVGEFLILIGSFVHVPW 422
                RD  Q+ GL + I  LP    + L  A AS G+PG   FV EFLI  GSF   PW
Sbjct: 347 RVTGRRDRDQLSGLLNPIRGLPLTAGLLLLAAMASAGIPGLVGFVAEFLIFQGSFAIFPW 406

Query: 423 ITV--IATTGLVFGSVYSLIMIHRAYFGPAKTDTVLA---GMDGRELIMVLGLAVLLILL 477
            TV  IA +GL   +VY + +I+RA FG  K D   A    +   E    + LA+ ++ L
Sbjct: 407 ATVGCIAASGLT--AVYFVSLINRACFG--KLDNQEARWRPVTVSERWPAVVLALTVMAL 462

Query: 478 GVYPQ 482
           G+ PQ
Sbjct: 463 GLAPQ 467