Pairwise Alignments

Query, 510 a.a., NADH:ubiquinone oxidoreductase, membrane subunit M from Pseudomonas putida KT2440

Subject, 533 a.a., NAD(P)H-quinone oxidoreductase subunit D from Synechococcus elongatus PCC 7942

 Score =  310 bits (793), Expect = 1e-88
 Identities = 204/531 (38%), Positives = 292/531 (54%), Gaps = 44/531 (8%)

Query: 4   PWL---ILIPFIGGF-LCWLGERFGATLPRWIALLTMSLLLGIGLW-LWGTGDYTLAPAP 58
           PWL   IL+P +    +  + ++ G T+ RW +L        + ++  W   D + A   
Sbjct: 7   PWLTGIILLPILAALPIPLIPDKDGRTV-RWYSLFVGLADFALMVYAFWQHFDRSEAGLQ 65

Query: 59  GAEPAWALEYKVEWIKRFGISIHLALDGLSLLMILLTGLLGVLSVLCSWKEIQRHVGFFH 118
             E       K+ W+ + G++  LA+DGLS+ ++LLTGL+  L++L SW  I      FH
Sbjct: 66  MVE-------KISWVPQIGLNWSLAVDGLSMPLVLLTGLVTTLAILASWN-INVKPKLFH 117

Query: 119 LNLMWILGGVVGVFLALDLFLFFFFWEMMLVPMYFLIALWGHSSADGKKTRIYAATKFFI 178
             L+ + G  + VF A D+ LFF  WE+ LVP+Y LI++WG     G K R YAATKF +
Sbjct: 118 FLLLLLYGAQIAVFTAQDMMLFFLVWELELVPVYLLISIWG-----GPK-RQYAATKFIL 171

Query: 179 FTQASGLIMLVAILGLVLVNYNTTGVLTFNYSDLLKAELPAGIEYVLMLGFFIAFAVKLP 238
           +T  + L +LVA L L     +     +F+ ++L   +    +E +   GF IAF VKL 
Sbjct: 172 YTALASLFILVAGLALAFSGDS----FSFDLTELGLKDYSLWLELLAYAGFLIAFGVKLS 227

Query: 239 VVPFHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLLRFALPLFPNASAEFAPIAMTLGLI 298
           + P H+WLPDAH +A   GS+ LAGILLK   Y L+RF + L P A   FAP+   LG++
Sbjct: 228 IFPLHTWLPDAHGEANAPGSMLLAGILLKMGGYALIRFNVQLLPEAHIRFAPVLAVLGIV 287

Query: 299 GIFYGAFLAFAQTDIKRLIAFSSVSHMGFVLIGIYSGSQQALQGAVIQMLAHGLSAAALF 358
            I YGA  AFAQ ++KR IA+SS+SHMGFVL+GI + +   L GA++QML+HGL AAALF
Sbjct: 288 NIIYGALNAFAQDNLKRKIAYSSISHMGFVLLGIAAYNSLGLNGALLQMLSHGLIAAALF 347

Query: 359 ILSGQLYERLHTRDMRQMGGLWHRIAYLPAISLFFAAASLGLPGTGNFVGEFLILIG--- 415
            L+G  YER HT  + Q+ GL  ++    A+    A ASL LPG   FV E  + +G   
Sbjct: 348 FLAGVAYERTHTLQIPQISGLAKQMPITFALFTVTAMASLALPGMSGFVSELTVFLGFTD 407

Query: 416 SFVHVPWITV---IATTGLVFGSVYSLIMIHRAYFGP--AKTDTVLAGMDGRELIMVLGL 470
           S     + TV   +A  GLV   +Y L M+ R ++G    +   VLA    REL +   L
Sbjct: 408 SVYSSGFRTVTILLAAVGLVLTPMYLLSMLRRIFYGTYNIQLGQVLADAKPRELFVAFCL 467

Query: 471 AVLLILLGVYP----QPFLDTSAATMSGVQQWL--------GSAFTQLASA 509
            V  + +G YP    Q +  T+ A  + VQ  L        GS ++Q+ +A
Sbjct: 468 LVPTLAIGFYPKLTTQVYDVTTTALAAQVQSNLPVVALAQQGSLYSQMPAA 518