Pairwise Alignments

Query, 510 a.a., NADH:ubiquinone oxidoreductase, membrane subunit M from Pseudomonas putida KT2440

Subject, 496 a.a., proton-translocating NADH-quinone oxidoreductase, chain M from Synechococcus elongatus PCC 7942

 Score =  294 bits (753), Expect = 4e-84
 Identities = 187/488 (38%), Positives = 273/488 (55%), Gaps = 27/488 (5%)

Query: 2   ILPWLILIPFIGG--FLCWLGERFGATLPRWIALLTMSLLLGIGLWLWGTGDYTLAPAPG 59
           +L  LI +P +     LCW G    A   R  A +     L I + L+   D  +     
Sbjct: 1   MLSALIWLPIVAATVLLCWPGTLSAAWAQR-SAAIAAGAALAIAIALFFQFDPQIHD--- 56

Query: 60  AEPAWALEYKVEWIKRFGISIHLALDGLSLLMILLTGLLGVLSVLCSWKEIQRHVGFFHL 119
               W L  ++ WI++ G+   L +DGLSL ++ L  LL  L +    ++ QR   ++ L
Sbjct: 57  ----WQLLEQLPWIEQLGLGYRLGVDGLSLPLVGLNALLTFLIIAGLERQEQRSRLYYGL 112

Query: 120 NLMWILGGVVGVFLALDLFLFFFFWEMMLVPMYFLIALWGHSSADGKKTRIYAATKFFIF 179
            L+ + G V G FLA DL LFF F+E+ L+P+Y LI++WG +       R YAATKF I+
Sbjct: 113 MLL-LSGAVSGAFLAQDLLLFFVFYEVELIPLYLLISIWGGAR------RGYAATKFLIY 165

Query: 180 TQASGLIMLVAILGLVLVNYNTTGVLTFNYSDLLKAELPAGIEYVLMLGFFIAFAVKLPV 239
           T  SG ++L+  L L +++    G  +F Y+  L A LP   +  L++   +AF +K P+
Sbjct: 166 TALSGALLLIGFLALTILS----GAGSFAYNPNLAAVLPIAQQVTLLVLILVAFGIKTPI 221

Query: 240 VPFHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLLRFALPLFPNASAEFAPIAMTLGLIG 299
           VPFH+WLPDAH +A T  S+ LAG+LLK   YG+LRF L LFP      AP    L ++ 
Sbjct: 222 VPFHTWLPDAHVEASTPVSMMLAGVLLKLGTYGILRFGLGLFPQVWPIVAPWLAGLAVVS 281

Query: 300 IFYGAFLAFAQTDIKRLIAFSSVSHMGFVLIGIYSGSQQALQGAVIQMLAHGLSAAALFI 359
             YG+  A  Q D+K+++A+SS+ HMG++L+   + +  +L GAV QM++HGL +A LF+
Sbjct: 282 TLYGSLSAIVQQDMKKMVAYSSIGHMGYILLAAAAATPLSLLGAVCQMISHGLISALLFL 341

Query: 360 LSGQLYERLHTRDMRQMGGLWHRIAYLPAI-SLFFAA--ASLGLPGTGNFVGEFLILIGS 416
             G +Y R  TRD+R + GL      LP + SL   A  AS GLPG   F+ EF+I  GS
Sbjct: 342 EVGFVYSRTGTRDLRVLQGLLTPERGLPIVGSLMILAVMASGGLPGMVGFIAEFMIFRGS 401

Query: 417 FVHVPWITVIATTGLVFGSVYSLIMIHRAYFG--PAKTDTVLAGMDGRELIMVLGLAVLL 474
           F      T+    G    SVY L++++RA+FG  P + +T L  +  RE I  L LA L+
Sbjct: 402 FSTFTVQTLFCMVGTGLTSVYFLLLVNRAFFGRLPDQMET-LPNVALREHIPALMLATLI 460

Query: 475 ILLGVYPQ 482
           ++ GV PQ
Sbjct: 461 VIFGVQPQ 468