Pairwise Alignments

Query, 510 a.a., NADH:ubiquinone oxidoreductase, membrane subunit M from Pseudomonas putida KT2440

Subject, 510 a.a., Proton-translocating NADH-quinone oxidoreductase, chain M (NCBI) from Rhodospirillum rubrum S1H

 Score =  351 bits (901), Expect = e-101
 Identities = 185/478 (38%), Positives = 291/478 (60%), Gaps = 21/478 (4%)

Query: 29  RWIALLTMSLLLGIGLWLWGTGDYTLAPAPGAEPAWALEYKVEWIKRFGISIHLALDGLS 88
           R +ALLT      + L LW   D        A+  +    KV W+  +GI+  + +DG+S
Sbjct: 36  RNVALLTTGFTFLVSLGLWFGFD-------PAQSGFQFVEKVSWLPDYGINYQMGVDGIS 88

Query: 89  LLMILLTGLLGVLSVLCSWKEIQRHVGFFHLNLMWILGGVVGVFLALDLFLFFFFWEMML 148
           +L +LL+  L  L +L SW  I + V  + +  + +   +VG+F ALD  +F+ F+E +L
Sbjct: 89  VLFVLLSTFLTPLCILASWTSITKRVKEYMVAFLVLETMMVGMFCALDFVVFYVFFEGVL 148

Query: 149 VPMYFLIALWGHSSADGKKTRIYAATKFFIFTQASGLIMLVAILGLVLVNYNTTGVLTFN 208
           +PM+ +I +WG         R+YA+ KFF++T A  ++M+VA+L +  +   TT + T  
Sbjct: 149 IPMFLIIGIWGGGR------RVYASFKFFLYTLAGSVLMMVAMLAMY-IEAGTTDIPT-- 199

Query: 209 YSDLLKAELPAGIEYVLMLGFFIAFAVKLPVVPFHSWLPDAHAQAPTAGSVDLAGILLKT 268
              L+    PA ++  L L  F +FAVK+P+ P H+WLPDAH +APTAGSV LAG+LLK 
Sbjct: 200 ---LMSHGFPAAMQTWLWLAMFASFAVKVPMWPVHTWLPDAHVEAPTAGSVILAGVLLKM 256

Query: 269 AAYGLLRFALPLFPNASAEFAPIAMTLGLIGIFYGAFLAFAQTDIKRLIAFSSVSHMGFV 328
            AYG LRF++P+ P ASA+FAP    L +IG+ Y + +A  Q D+K+LIA+SS++HM FV
Sbjct: 257 GAYGFLRFSIPMLPLASADFAPFIFALSVIGVIYTSLVALVQEDMKKLIAYSSIAHMAFV 316

Query: 329 LIGIYSGSQQALQGAVIQMLAHGLSAAALFILSGQLYERLHTRDMRQMGGLWHRIAYLPA 388
             GI++ +Q +++GA+ QML+HG+ + ALF+  G +Y+RLHTR++ + GGL   +     
Sbjct: 317 TAGIFAVNQMSVEGALYQMLSHGVVSGALFLCVGVVYDRLHTREISRYGGLAKNMPRYAL 376

Query: 389 ISLFFAAASLGLPGTGNFVGEFLILIGSFVHVPWITVIATTGLVFGSVYSLIMIHRAYFG 448
           + + F  AS+GLPGTG F+GEFLI++G F    W+ +   TG++ G+ Y L +  R  FG
Sbjct: 377 VFMVFMMASIGLPGTGGFIGEFLIMMGVFQISTWVALFIATGVILGAAYMLYLYRRVIFG 436

Query: 449 PAKTDTV--LAGMDGRELIMVLGLAVLLILLGVYPQPFLDTSAATMSGVQQWLGSAFT 504
             + + +  L  ++ RE+ +   L VL++ +GVYP  FLD    +++ +     +A T
Sbjct: 437 KLEKEDLKGLLDLNRREVAIFAPLLVLVLWMGVYPSTFLDFMHTSVADLVSTYETALT 494