Pairwise Alignments

Query, 617 a.a., NADH:ubiquinone oxidoreductase, membrane subunit L from Pseudomonas putida KT2440

Subject, 643 a.a., NADH-plastoquinone oxidoreductase, chain 5 (NCBI) from Rhodospirillum rubrum S1H

 Score =  366 bits (940), Expect = e-105
 Identities = 234/646 (36%), Positives = 345/646 (53%), Gaps = 38/646 (5%)

Query: 3   LLFLTFVFPLIGFLLLSFSRGRFSENLSALIGVGSVGLSAATAAYVIWQFNVAPPEGGAY 62
           L FL    PL+  +   F      +  +  +    + +SA  + ++ +   +    G   
Sbjct: 2   LYFLAVFLPLLTAIATGFFGRALGDKGAQRLTCLGMAISALFSWFIFFDTALG---GNNT 58

Query: 63  SQLLWQWMSVDGFAPNFTLYLDGLSVTMLGVVTGVGFLIHLFASWYMRGEAGYSRFFSYT 122
           +  L+ W+       ++ L +D LS  ML VVT + F++H+++  YM  +A   RF +Y 
Sbjct: 59  TVTLFTWVISGDLHFDWALKIDTLSAVMLMVVTTISFMVHIYSVGYMHHDASVPRFMAYL 118

Query: 123 NLFIASMLFLILGDNLLFIYFGWEGVGLCSYLLIGFYYSNRNNGNAALKAFIVTRIGDVF 182
           +LF   ML L+  DNL+ ++FGWEGVGL SYLLIGF+Y   +   AA+KAF+V R+GD  
Sbjct: 119 SLFTFFMLMLVTADNLVQMFFGWEGVGLASYLLIGFWYEKPSANAAAIKAFVVNRVGDFG 178

Query: 183 MAIGLFILFAQLGTLNVQELLVLAPQKFQA-----GDTW--MVLATLMLLGGAVGKSAQL 235
             +G+F +F   GT+ +  +   A Q         G  W  M +  L+L  GA+GKSAQL
Sbjct: 179 FTLGIFGVFFVFGTVGLDAIFAGAAQHANDVVTFFGIEWHAMTILCLLLFIGAMGKSAQL 238

Query: 236 PLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTNGLFLLAPDILHLVGVVGGLTLVL 295
            L TWL DAM GPTPVSALIHAATMVTAGV+++AR + LF+L+   + +V +VG  T + 
Sbjct: 239 GLHTWLPDAMEGPTPVSALIHAATMVTAGVFMVARMSPLFVLSDTAMTVVTIVGASTAIF 298

Query: 296 AGFAALVQTDIKRILAYSTMSQIGYMFLALGVGAWDAAIFHLMTHAFFKALLFLASGAVI 355
           A     VQ DIKR++AYST SQ+GYMF ALGVGA+ A IFHLMTHAFFKALLFL +G+VI
Sbjct: 299 AATVGCVQNDIKRVIAYSTCSQLGYMFFALGVGAFGAGIFHLMTHAFFKALLFLGAGSVI 358

Query: 356 VACHHEQNIFKMGGLWKKLPLAYASFVVGGAALAALPIVTVGFYSKDEILWEAFASGNTG 415
            A   EQ++ +MGG+W+ +PL YA   +G  AL  +P    GF+SKD IL  A+A+    
Sbjct: 359 HAMSDEQDMRRMGGIWRMVPLTYALMWIGSLALMGVP-PFAGFFSKDMILEVAYAAHGGA 417

Query: 416 LLYA---GLVGAFMTSLYTFRLIFIAFHGEAKTEAHAGHGISH-----WLPLGVLIVLST 467
             YA   G++ A +T+ Y+ RLI + FHG  + + H    +        LPL VL + + 
Sbjct: 418 GAYAFWLGILAATLTAFYSTRLIIMTFHGAPRADEHVMAHVHESPRVMTLPLIVLAIGAV 477

Query: 468 FVGAWITPPLAG------------VLPESAGHAGGEAKHALEITSGAIAIAGILLAALLF 515
             G        G               E   H   +    +++    +   G+ L   L+
Sbjct: 478 VAGGLGADAFIGDGRFAFWGTAIAQSAEDVTHHAHDVPGWVKLLPLVVTALGVGLGVFLY 537

Query: 516 LGKRRFVSAVANSGIGRVLSAWWFAAWGFDWIYDKLFVKPYLLISHILRKDPVDRTI-GL 574
             + +  + +A S  G  L  +    W FD +YD++F+KP  L+     KD     I G+
Sbjct: 538 GVRPKLPAKLAASAPG--LYRFLLNKWYFDELYDRIFIKPAFLLGRGFWKDGDGAIIDGV 595

Query: 575 IPRMARGGHVAMS----KTETGQLRWYTASIAVGAVLVLGAVVVAA 616
            P        +++    + +TG L  Y  ++  G   V+  V+V +
Sbjct: 596 GPDGVASATRSLARWFGRMQTGYLYHYAFAMITGIAGVVTWVMVTS 641