Pairwise Alignments

Query, 593 a.a., NADH-quinone oxidoreductase subunit C/D from Pseudomonas putida KT2440

Subject, 471 a.a., Ni/Fe hydrogenase subunit alpha from Methanococcus maripaludis S2

 Score = 44.7 bits (104), Expect = 9e-09
 Identities = 40/168 (23%), Positives = 66/168 (39%), Gaps = 29/168 (17%)

Query: 223 GAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMAERQSWHSFIPYTDRIDYLGGVMNNLPYV 282
           G  ++ L  D    +D V       RG EK  E +       +T RI  +  V +NL   
Sbjct: 14  GHGKVTLSFDDSGKLDKVNFHVVEVRGFEKFLEGRYIEDAPVFTPRICGICQVSHNLASA 73

Query: 283 LAVEKLAGIKVPQKVDVIRIMLAEFFRITSHLLFLGTYIQDVGAMTPVFFTFTD------ 336
            AV+ + G+K+P+  D++R ++ +   + SH L  G       A   + F  TD      
Sbjct: 74  RAVDNVFGVKIPKTADMLRNLMQQASNVHSHALHFGML-----ASPDLMFPMTDDALKRN 128

Query: 337 ------------------RQRAYTVIEAITGFRLHPAWYRIGGVAHDL 366
                             R+   T+I+ + G  +HP    +GG +  L
Sbjct: 129 VLGVASENMDVVKDAISMRKIGQTIIQKVGGRAIHPVTAVVGGQSKPL 176