Pairwise Alignments

Query, 593 a.a., NADH-quinone oxidoreductase subunit C/D from Pseudomonas putida KT2440

Subject, 417 a.a., NADH-quinone oxidoreductase subunit D from Burkholderia phytofirmans PsJN

 Score =  308 bits (789), Expect = 3e-88
 Identities = 164/410 (40%), Positives = 229/410 (55%), Gaps = 29/410 (7%)

Query: 212 LNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMAERQSWHSFIPYTDRIDY 271
           LN GP HP+AHG  R+VL+LDGE I    P IG  HR  EK+AE +++   +PY DR+DY
Sbjct: 9   LNFGPQHPAAHGVLRLVLELDGEVIQRADPHIGLLHRATEKLAETKTFIQSVPYMDRLDY 68

Query: 272 LGGVMNNLPYVLAVEKLAGIKVPQKVDVIRIMLAEFFRITSHLLFLGTYIQDVGAMTPVF 331
           +  ++N   YV+A+EKL GI+VP +   IR+M  E  R+ +HL+++G +  DVGAM    
Sbjct: 69  VSMMVNEHGYVMAIEKLLGIEVPVRAQYIRVMFDEVTRVLNHLMWIGAHALDVGAMAVFL 128

Query: 332 FTFTDRQRAYTVIEAITGFRLHPAWYRIGGVAHDLPRGWDK------------------- 372
           + F +R+    V EA++G R+H A+YR GGV  DLP    +                   
Sbjct: 129 YAFREREDLMDVYEAVSGARMHAAYYRPGGVYRDLPDAMPQYKASKIRNAKALSKMNENR 188

Query: 373 ------LVKDFVEWLPKRLDEYTKAALQNSILKGRTIGVAAYNTKEALEWGTTGAGLRAT 426
                  + DF    PK +DEY      N I K R +G+   + + AL  G TGA LR +
Sbjct: 189 QGSLLDFIDDFFTRFPKCVDEYETLLTDNRIWKQRLVGIGVVSPERALNLGMTGAMLRGS 248

Query: 427 GCNFDLRKARPYSGYENFEFEVPLAHNGDAYDRCMVRVEEMRQSIRIIDQC---LRNMPE 483
           G  +DLRK +PY  Y+  +F++P+  NGD YDR +VRVEEMRQS RI+ QC   LR  P 
Sbjct: 249 GIEWDLRKKQPYEVYDKLDFDIPVGVNGDCYDRYLVRVEEMRQSTRIVKQCIEWLRKNP- 307

Query: 484 GPYKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTS 543
           GP   D+    PP +     ++E LI HF   + G  +P  E++  +E  KG    YL S
Sbjct: 308 GPVMIDNHKVAPPSRVGMKSNMEELIHHFKLFTEGFHVPEGEAYAAVEHPKGEFGIYLIS 367

Query: 544 DGGTMSYRTRIRTPSYPHLQQIPSVIKGSMVADLIAYLGSIDFVMADVDR 593
           DG    YR +IR P Y HL  +  + +G M+AD +  +G+ D V  +VDR
Sbjct: 368 DGANKPYRLKIRAPGYAHLSTLDEMARGHMIADAVTIIGTQDIVFGEVDR 417