Pairwise Alignments

Query, 129 a.a., Transcriptional regulator, Cro/CI family from Pseudomonas putida KT2440

Subject, 140 a.a., putative helix-turn-helix protein from Phaeobacter inhibens DSM 17395

 Score = 41.6 bits (96), Expect = 4e-09
 Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 14/117 (11%)

Query: 4   IGMRLREERERLGMTQRVFGDIGGVEPNAQGKYESGERTPRLDYLAALATR-GVDALYVL 62
           +G RL   R  +G+TQ    +  GV   A   YE G+R   ++ L A++ R  VDA ++L
Sbjct: 12  MGARLAIARNEVGLTQTAMAEAIGVSHRAYHSYEKGQRGLPVEALVAMSDRFEVDAAWIL 71

Query: 63  SGLRTPAA---HEGLNTDESGLLGAFR----KLRSDDQAALL------HLLGRLAND 106
            G +T  A    E L   E+ L         K++S+ + A++      HL GR   D
Sbjct: 72  LGTQTVRASHDFEALKQIETSLDQHLNEENIKIKSEKRGAIVARWYQSHLEGREVRD 128