Pairwise Alignments

Query, 607 a.a., UvrABC system protein C from Pseudomonas putida KT2440

Subject, 639 a.a., Excinuclease ABC, C subunit (NCBI) from Rhodospirillum rubrum S1H

 Score =  458 bits (1179), Expect = e-133
 Identities = 263/609 (43%), Positives = 362/609 (59%), Gaps = 15/609 (2%)

Query: 9   AFLATCSGRPGVYRMFDGEARLLYVGKAKNLKKRLASYFRKTGLAPKTAALVARIAQVET 68
           A L T    PGVYRM DG+  +LYVGKA+NLK+R+ +Y +   L  +   ++A    +E 
Sbjct: 35  AALRTMPSSPGVYRMIDGKGDVLYVGKARNLKRRVINYTQPHRLPVRIQRMIAATLTMEV 94

Query: 69  TITANETEALLLEQNLIKEWRPPYNILLRDDKSYPYVFL-SDGEFPRLGIHRGAKKAKGR 127
             T  E EALLLE NLIK+ +P YNILLRDDKS+PY+ + SD  FPR+   RG  +  G 
Sbjct: 95  LTTHTEAEALLLESNLIKKLKPRYNILLRDDKSFPYIEITSDHAFPRIVKFRGTLRKGGE 154

Query: 128 YFGPYPSAGAIRESLSLLQKAFSVRQCEDSYYANRTRPCLQYQIKRCKGPCTDLVTAEEY 187
           YFGP+ SAGA+  +L+ LQK F +R C D+ +A+R+RPCL +QIKRC  PC D V   +Y
Sbjct: 155 YFGPFASAGAVTSTLTALQKTFLLRTCADNVFASRSRPCLLFQIKRCAAPCVDRVAEADY 214

Query: 188 AEDVRHSVMFLEGRSQQLGNELNAEMEKAAMALDFEKAAELRDQIALLRRVQDQQYIEGG 247
              V  +  FL G S+ L ++L   M++AA ALD+E+AA  RD+I  L  VQ  Q I   
Sbjct: 215 KALVEEARAFLSGSSKALQHDLAKRMDEAAQALDYEQAAIFRDRIKALTNVQSHQDINLP 274

Query: 248 S-GDVDVIAAFVNPGGACVHLISVRGGRVLGSKNFFPQVGIEEEVAEVMAAFLSQYYLG- 305
           + G+ DVIA     G  CV +   RGGR  G+++FFP    +E + EV+ AFL Q+Y G 
Sbjct: 275 TLGEADVIACHQAGGQTCVQVFFFRGGRNNGNRSFFPAHAGDEGLPEVLEAFLGQFYAGF 334

Query: 306 NAERELPGELIVNVVHEDFNAITEALHTLRGRELTISHRVRGTRARWQQLAVTNAEQALN 365
              RE+   L+ ++ H D   + +AL    G  + +    RG+R +    A+ NA +AL 
Sbjct: 335 PPPREI--LLLTDIPHHDL--VEQALCLRAGHRVRLVVPRRGSRRKLIDHALANAREALG 390

Query: 366 ARLANRQHMAARFEALAEVLGLDEVPQRLECYDISHSSGEATVASCVVFGPEGPIKSDYR 425
            RLA         E  A   GLD   QR+E YD SH SG   V   VV GPEG +K+ YR
Sbjct: 391 RRLAESSAQRTLLEGTAVAFGLDGPLQRVEIYDNSHISGTHAVGGMVVAGPEGFMKAAYR 450

Query: 426 RFNIE--DVTAGDDYAAMHQALTRRYGRIKDGE-----GKLPDVLLVDGGKGQLNMARDV 478
           +FNI   D+T GDDYA M + + RR+ R +  +     G+ PD++L+DGG GQLN  R+ 
Sbjct: 451 KFNIRSPDITPGDDYAMMREVMIRRFARARKEDPDRDRGQWPDLVLIDGGLGQLNAVREA 510

Query: 479 MQELGFTDLTLLGVAKGVTRKAGFETLYLNDVHHEFTLKGDSSALHLIQQIRDEAHRFAI 538
           + E+G  D+ L+GVAKG  R AG E  ++      F L+ +   L+ IQ++RDEAHRFAI
Sbjct: 511 LAEIGVEDVPLVGVAKGPDRDAGRERFFVPG-RPPFMLRHNDPVLYFIQRLRDEAHRFAI 569

Query: 539 TGHRARRGKARRVSSLEDVAGVGPKRRRDLLKHFGGLQELNRASIDEIAKAPGISKKLAE 598
             HR RR KA  VS L+ V G+G  R++ LL HFG  + +++A + ++    GIS  LA+
Sbjct: 570 GSHRTRRSKAIGVSPLDSVPGIGASRKKALLHHFGSAKAVSQAGLTDLEAVEGISAALAK 629

Query: 599 SIYASLHSE 607
            +Y   HSE
Sbjct: 630 KLYDHFHSE 638