Pairwise Alignments

Query, 607 a.a., UvrABC system protein C from Pseudomonas putida KT2440

Subject, 527 a.a., excinuclease ABC subunit UvrC from Methanococcus maripaludis S2

 Score =  303 bits (775), Expect = 2e-86
 Identities = 188/540 (34%), Positives = 300/540 (55%), Gaps = 37/540 (6%)

Query: 18  PGVYRMFDGEARLLYVGKAKNLKKRLASYFRKTGLAPKTAALVARIAQVETTITANETEA 77
           PG Y   +    ++YVGKAKNLKKR++SYF K    PKT  LV  I ++E  +T NE EA
Sbjct: 11  PGCYIYKNESGTVIYVGKAKNLKKRVSSYFNKKNHDPKTEKLVKSIYEMEFIVTDNEVEA 70

Query: 78  LLLEQNLIKEWRPPYNILLRDDKSYPYVFLSDGEFPRLGIHRGAKKAKGRYFGPYPSAGA 137
           L+LE  LIK++ P YNI L+D K+Y Y+++S+  FPR+GI R  K  KG+++GP+ SA  
Sbjct: 71  LILENTLIKKYSPKYNIDLKDSKNYAYIYISEENFPRIGISRN-KSKKGKFYGPFTSAKE 129

Query: 138 IRESLSLLQKAFSVRQCEDSYYANRTRPCLQYQIKRCKGPCTDLVTAEEYAEDVRHSVMF 197
               L +L+K F +R C++ +     RPCL++ IK C  PC+  +T+++Y   ++ +   
Sbjct: 130 RDYVLDVLKKTFKIRSCKNMH----KRPCLRHHIKNCTAPCSGDITSKDYLNQIKKAEHI 185

Query: 198 LEGRSQQLGNELNAEMEKAAMALDFEKAAELRDQIALLRRVQDQQYIEGG-SGDVDVIAA 256
           L+G    L +EL  EM + +  L FE+A  +R++I  + R++ +Q ++     + DVI+ 
Sbjct: 186 LKGNIDSLIHELKNEMNEKSKNLQFEEALLIREEINAIERLKTRQNVKRDVKYNEDVISI 245

Query: 257 FVNPGGACVHLISVRGGRVLGSKNFFPQVGIEEEVAEVMAAFLSQYYLGNAERELPGELI 316
               G   + + +V  G +   K F  +    E   E    FL QYY   +E ++P E+I
Sbjct: 246 LEKSGKLHIMVFNVLKGTLFDRKYF--EFDYTENFFE---EFLIQYY---SENDVPSEII 297

Query: 317 VNV----VHEDFN-----AITEALHTLRGRELTISHRVRGTRARWQQLAVTNAEQALNAR 367
           ++     + ED N     A+ E L   +G ++      +G + +   LA+ N E  +N  
Sbjct: 298 ISELPKNLEEDNNEYSSDALLEYLSKKKGSKVAFKIPKQGEKKQLLDLAIKNLEIYVNGN 357

Query: 368 LANRQHMAARFEALAEVLGLDEVPQRLECYDISHSSGEATVASCVVFGPEGPIKSDYRRF 427
                    + ++L   L LD+ P  +EC+DISH SG +TV S V F    P K +YRRF
Sbjct: 358 -------EIKVQSLKNKLMLDKSPNIIECFDISHLSGTSTVGSVVQFRNGKPDKKNYRRF 410

Query: 428 NIEDVTAGDDYAAMHQALTRRYGRIKDGEGKLPDVLLVDGGKGQLNMARDVMQELGFTDL 487
            I+ V+  DD+ ++ + + RRY ++ +   +LPD++++DGGKGQL+ A   +++L    +
Sbjct: 411 KIKTVSGIDDFKSISEVVFRRYSKLLEENLELPDLIIIDGGKGQLSSAFSELRKLKL-KI 469

Query: 488 TLLGVAKGVTRKAGFETLYLNDVHHEFTLKGDSSALHLIQQIRDEAHRFAITGHRARRGK 547
            L+ +AK        E +Y   + +   +K +  A   IQ+IRDEAHRFAI  +R  R K
Sbjct: 470 PLISIAKRE------EEIYTPGIENPLPIKKNEKASLFIQEIRDEAHRFAINYNRLLRKK 523