Pairwise Alignments

Query, 510 a.a., transposase from Pseudomonas putida KT2440

Subject, 508 a.a., Mobile element protein from Pseudomonas fluorescens FW300-N2E2

 Score =  276 bits (707), Expect = 1e-78
 Identities = 174/499 (34%), Positives = 268/499 (53%), Gaps = 20/499 (4%)

Query: 1   MISVPDNLPDDPAALKLLLAQLLAE-RTVDKGQIVD-------LKEQVKLLRDRLFNRKS 52
           M S P+    DP  L+ L AQL+    T+DK QI         L  ++ LL+   F ++S
Sbjct: 1   MTSHPNLDQLDPEELRALAAQLIQRVETMDK-QITHHKSVNEKLAHEIALLKRFKFAKRS 59

Query: 53  EQTVESNTPQLALFNEPESQWVPTADDADEEVVAPSKQR--GKRKPLSADLPRIEVIHDL 110
           EQ        L    + +   +    +A +     +K R   KR PL    PR  +IH  
Sbjct: 60  EQLSPDQASLLRDLIDTDIAAIEAELEALQPASVEAKVRLQPKRAPLPPQFPRT-LIHHE 118

Query: 111 PEHELTCACGCRKHVVGEQTSEQLDIVPMQIRVLKHVRKIYGCRGCESAPVTADKPAQLI 170
           P++   C CGC    +GE TSE+LD  P    V +H+R  + C  CE+  + A  PA +I
Sbjct: 119 PDNT-HCQCGCALKRIGEDTSEKLDYTPGVFTVERHIRGKWVCEQCETL-IQAPVPAHVI 176

Query: 171 EKSMASPSVLAMLLTTKYVDGLPLHRFETVLNRHGIEIPRQTLARWVIQCSEHFQPLLNL 230
           +K + + S+LA ++  K+ D LPL+R E +  R G+ I R TLA+WV  C    QPL++ 
Sbjct: 177 DKGIPTASLLAHIMVAKFADHLPLYRQEKIFGRAGLPIARSTLAQWVGNCGVQLQPLVDA 236

Query: 231 MRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQASGP-PDRQVVLFDYTTSRAQEV 289
           +R+ +L   V+H DET VQ+L  P    T ++++W  A+    D   V++D++ SRA E 
Sbjct: 237 LREAVLTHGVVHADETPVQMLT-PGAKKTHRAYVWAYATSQFSDLAAVVYDFSPSRAGEH 295

Query: 290 PLRLLEGYRGYVMTDDYAGYNALALQPGVERLACMAHVRRKFVEAQKVQPKGKTGRADVA 349
               L  + G ++ DD+AGY A   + GV  + CMAH RRKF +   +    K+  A+ A
Sbjct: 296 ARNFLGHWNGKLVCDDFAGYKA-GFELGVTEIGCMAHARRKFFD---LHATNKSQIAEKA 351

Query: 350 LTMINKLYGIERDLKDASDEQRFIGRQERSLPILEQLKSWLDKTHSQVTPQSVLGKAVLY 409
           L  I  LY +ER+ ++     R + RQE++ PI++ L +W+      V     + KA+ Y
Sbjct: 352 LHYIASLYEVEREARELEPSIRQLIRQEKASPIIDALYTWMIAQRQLVPEGPAIAKALDY 411

Query: 410 LANNWNRLERYVEAGHLPIDNNLAERAIKPFVIGRKAWLFSDTPKGATASAQIYSLVETA 469
               W  L RY++ G +PIDNN  E  I+P+ +GR  WLF+ + +    +A I SL+++A
Sbjct: 412 SLKRWIALTRYLDDGAVPIDNNWCENQIRPWALGRSNWLFAVSLRSGKRAAAIMSLIQSA 471

Query: 470 KVNGQEPYTWLRHVLERLP 488
           ++NG +PY +L+ VL RLP
Sbjct: 472 RLNGHDPYAYLKDVLNRLP 490