Pairwise Alignments

Query, 510 a.a., transposase from Pseudomonas putida KT2440

Subject, 537 a.a., transposase number 3 for insertion sequence ISRM26 from Sinorhizobium meliloti 1021

 Score =  218 bits (555), Expect = 4e-61
 Identities = 155/529 (29%), Positives = 252/529 (47%), Gaps = 37/529 (6%)

Query: 7   NLPDDPAALKLLLAQLLAERTVDK-----GQIVDLKEQVKLLRDRLFN--------RKSE 53
           +LPDD  ALK ++  L  E+   +      +I  L+   K   +R+ N        ++++
Sbjct: 7   DLPDDVDALKAMVLALAREQAAKEVRLKVAEIARLEAVEKSANERIANLTLIMKVLQRTQ 66

Query: 54  QTVESNTPQLALFNEPESQWVPTADDADEEVVAPSKQRGKRKPLSADLPR------IEVI 107
               S   +L + +E  S      +     + +   +  K KP  A  PR      +E I
Sbjct: 67  NGKRSERLRLGVNDEQVSFAFEEVETGLSAIRSELDRAAKDKPKRAPRPRKGFAAHLERI 126

Query: 108 HDLPEHELTCAC-GCRKHVVGEQTSEQLDIVPMQIRVLKHVRKIYGCRGCESAPVTADKP 166
            ++ E E+   C G  K ++GE  SE+LD+VP + RV+   R  Y  RG +   V A  P
Sbjct: 127 EEVIEPEIPAGCEGLAKVLIGEDRSERLDVVPPKFRVIVTRRPKYAFRGSDGV-VQALAP 185

Query: 167 AQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLNRHGIEIPRQTLARWVIQCSEHFQP 226
           A +IE  + +  +LA +  +KY DGLPL+R E +  R G+EI R  +A+W+       Q 
Sbjct: 186 AHIIEGGLPTERLLAYIAVSKYADGLPLYRQEAIYLRDGVEISRSLMAQWMGHLGFELQM 245

Query: 227 LLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS-----GPPDRQVVLFDY 281
           L + + +R+ E   I  DET +  L  P    T+++W+W  A      G     +V + +
Sbjct: 246 LADYILERVKEGERIFADETTLPTLA-PGSGKTTKAWLWAYARDDRPYGGTSPPMVAYRF 304

Query: 282 TTSRAQEVPLRLLEGYRGYVMTDDYAGYNALALQPG-------VERLACMAHVRRKFVEA 334
             SR  +   R L G+ G +  D Y+ Y  LA           V+   C AH+RRKF + 
Sbjct: 305 EDSRGADCVTRHLSGFTGILQVDGYSAYTNLAKTRAKTGSNETVQLAGCWAHLRRKFYD- 363

Query: 335 QKVQPKGKTGRADVALTMINKLYGIERDLKDASDEQRFIGRQERSLPILEQLKSWLDKTH 394
             +   G +  A   +  + +L+ IE +++    + R   RQE+S      L    +K  
Sbjct: 364 --LHISGVSQAATDTVLAMTELWRIEDEVRGKDADSRAARRQEKSSTTAASLFELWEKEL 421

Query: 395 SQVTPQSVLGKAVLYLANNWNRLERYVEAGHLPIDNNLAERAIKPFVIGRKAWLFSDTPK 454
            +V+ +S   +A+ Y       LER++  G + ID+N+ ERAI+P  I RK  LF+ +  
Sbjct: 422 GKVSGKSKTAEAIRYALTRREALERFLTDGRIEIDSNIVERAIRPQTITRKNSLFAGSEG 481

Query: 455 GATASAQIYSLVETAKVNGQEPYTWLRHVLERLPHASSVADYEALLPWN 503
           G    A + +L++T K+NG +P  WL   L R+      ++ EAL+PWN
Sbjct: 482 GGRTWAAVATLLQTCKMNGVDPLDWLSQTLTRIAQGWPASEIEALMPWN 530