Pairwise Alignments

Query, 291 a.a., putative type 4/6 secretion system from Pseudomonas putida KT2440

Subject, 436 a.a., Outer membrane protein ImpK/VasF, OmpA/MotB domain from Pseudomonas fluorescens FW300-N2E2

 Score =  125 bits (314), Expect = 2e-33
 Identities = 70/230 (30%), Positives = 108/230 (46%), Gaps = 1/230 (0%)

Query: 41  ASAQEQKPEPAYQGYPADPEFQLRGGCANLMLDAAAPLFGLVMRLRTLDELPNIKDVHQQ 100
           A   +  P PA    PA P    +    N +  AA PL  L+ RLR     P    +  Q
Sbjct: 25  AGRPQPTPAPAPLSMPAAPVLTGKAEGLNPLESAAGPLLALLTRLRNTIAHPAPASLRAQ 84

Query: 101 VRIQIDSIREEIRQHGYEPAQLLAYSYGLCLYIDEAVMERPWGKSSCWSHEPLLSIFHDE 160
           +   +    E     G     +L   Y LC  +DEAV+  PWG +S W  + LL   H+E
Sbjct: 85  LLAYLRQFEERAEAAGVVRNDVLLARYALCTALDEAVLSTPWGGTSDWGKQSLLITVHNE 144

Query: 161 TWGGEKIFTVITRLMQEPKRYQDVLEFMYFALCLGLKGKYALAPKGEETLNALIHQLHGI 220
            WGGEK+F ++   +Q P+    +LE +Y  +CLG +G+Y +   G   L AL  +   +
Sbjct: 145 AWGGEKVFQLLEHCLQSPRERLYLLELLYLCMCLGFEGRYRVMNDGRSQLEALRERTAAV 204

Query: 221 IRELRGPTPEEVCDPYTNVAPRNFRMSRIWPWWSPLVI-SAIAMAVAYGI 269
           IR  RG    E+   +  V     R+++  P W  + I +A+ +A+ +G+
Sbjct: 205 IRSARGDYERELSPHWRGVTVARDRLAQFMPPWIAVAIGAALLLALLFGL 254