Pairwise Alignments

Query, 338 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

Subject, 338 a.a., type VI secretion system baseplate subunit TssG from Vibrio cholerae E7946 ATCC 55056

 Score =  255 bits (651), Expect = 1e-72
 Identities = 139/329 (42%), Positives = 194/329 (58%), Gaps = 14/329 (4%)

Query: 1   MAHPDRQATADLAD--------KLLANAHQYNFFQLLERLHGLHGDDLEPRWADEATRLR 52
           M H +R A  DL           L  N  +YNF+QL+E L  L   D+ P   +     R
Sbjct: 1   MGHTERNAAVDLNSDPAQASPLSLPGNVREYNFYQLVELLQKLA--DINPESEEWERDCR 58

Query: 53  VRLASDPRLTFPVSDVYKAERMPGEDERYRVCTTFMGLHGTDSPLPTYYLEQVAYEHAQG 112
           +  +++P L F  SDV   E    +DER+ + T F GL G  SPLP + LEQ+  E   G
Sbjct: 59  LVFSANPSLGFSPSDVMALEAR--DDERWVMLTNFFGLSGAQSPLPGFILEQLVTEEPGG 116

Query: 113 VGVRPAFFDFFNHYLLSLLHRIWRKYRYYIRFQPGARDGFSQYMFALLGLNDKQLRGDTT 172
              +  F DFFN+ L++L++R+WRKYRYY+RFQPGA+D FS  +FAL+GL D  LRG+T 
Sbjct: 117 Y--KQPFLDFFNNRLINLVYRVWRKYRYYVRFQPGAQDVFSAQLFALVGLGDPDLRGETP 174

Query: 173 LPWSRLLSFAGVIASRGRAPGTVAGIIAHCFDLTHVQIREFETRTVTTNSKQLVSLGRSN 232
           + W ++L++AG +A R R+P  VAGIIAHCFDL  V IR++  R V+ +  Q ++LG+ N
Sbjct: 175 INWCKMLAYAGTLAGRSRSPQVVAGIIAHCFDLPDVSIRQWVRRRVSIDRSQQLALGKQN 234

Query: 233 GELGSTFMVGSRTRTRSSKFTILISELDQAQLHDLLPSGINFGRLRALIDFLLRDGLAYD 292
             LG   ++G      S KF I I  L +++  D LPSG  +  L  L++F+LR+ +AYD
Sbjct: 235 ARLGMDTVIGESVIDCSGKFIICIKRLSRSRFADFLPSGKEYQPLCKLVEFILREQMAYD 294

Query: 293 LELRLKQNALSPFYLHRSQGAYLGWTSFV 321
           LEL + +     F L   Q   LGWTSF+
Sbjct: 295 LELAMDEREAPLFCLDTRQNIALGWTSFL 323