Pairwise Alignments

Query, 167 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

Subject, 168 a.a., type VI secretion system contractile sheath small subunit from Vibrio cholerae E7946 ATCC 55056

 Score =  173 bits (439), Expect = 1e-48
 Identities = 90/166 (54%), Positives = 120/166 (72%), Gaps = 3/166 (1%)

Query: 4   RSDSVAPKERINIKYVPATGDEQAEVELPHKMMVLGDF-GLDDSRSLEDRQVMRIDKHTF 62
           +  SVAPKERINIKY+PATGD QAEVELP K +V+GDF G  +   LE+R  + +DK+ F
Sbjct: 3   KEGSVAPKERINIKYIPATGDAQAEVELPLKTLVVGDFKGHAEQTPLEERATVTVDKNNF 62

Query: 63  NNVLNDADVSLAMSVPSALDATPNAELAVNLQFKSIQDFGPDRIARQVPELNKLLQLREA 122
             V+ ++++ +  +V + L    NAEL V L FKS+ DF PD +A QVPEL KL++LREA
Sbjct: 63  EAVMRESELKITATVKNKLTDDENAELPVELNFKSLADFAPDAVASQVPELKKLIELREA 122

Query: 123 LVALKGPLGNVPTFRKQLQQLLNDAHARKQLAQELDLV--LEAPKA 166
           LVALKGPLGN+P FR++LQ LLN   +R++L  EL+L+   E P+A
Sbjct: 123 LVALKGPLGNIPAFRERLQSLLNSEESREKLLAELNLLSGQEEPQA 168