Pairwise Alignments

Query, 488 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

Subject, 520 a.a., type VI secretion-associated protein, VC_A0119 family from Pseudomonas stutzeri RCH2

 Score =  102 bits (254), Expect = 3e-26
 Identities = 120/474 (25%), Positives = 193/474 (40%), Gaps = 54/474 (11%)

Query: 28  FDGEDETYQA----IDQEMVKLGGL-QEASIDWDYIEEASAQYLERQCKHLRIVAHLSVA 82
           F G+D  Y +    ++ E+ K G L Q   IDW  + E S   L    K LR     + A
Sbjct: 23  FAGDDIRYSSEFELLETELAKAGALHQTTGIDWQKVREGSEMLLTSLSKDLR-----AAA 77

Query: 83  WLRSGCWERWGFT-----LALLGGMIDNYWETAHPTPGPKGFLTKRKIVGLLFNRLIDAL 137
           WL    ++R  F      L++L  +  N+W   HP   P+   T+   +  L       L
Sbjct: 78  WLTWSLFQRESFAGLQAGLSVLQYLCSNHWAELHPRK-PR---TRAAAINWL-------L 126

Query: 138 PRLDRFTYTPAHAAAAKGALARLLRQQEAA--QLAPAVLVELERLLHKHTALANGIGERD 195
           PRL++ T++       +  L R L +Q  A  Q     L E   LL       +G+ +R 
Sbjct: 127 PRLEQ-TFSEDVPVGEQLPLFRGLAEQLHALEQCLSGHLGEDAPLLLPLCRQLDGMVKRA 185

Query: 196 APKAPVESPQPAPLADVIATPKPCLSGG----NERETRRAILSMAELIN-------QQDP 244
           +          A +A V        + G    N++E  +A+ ++ E          +Q  
Sbjct: 186 SQGQAQPGTVGAAIAQVKQVASQVFAPGSPIENDKEALKAVRNLQEQARPLTAWWLKQRT 245

Query: 245 YDPTGYQLRRFGLWAHIQAAPQTRQCNRTELMAVPRDIASDYEEAIAGTVIDAALLQRVE 304
            D    +L R  LW  I + P+      T L  +P D  ++Y E  A  +  A LL  +E
Sbjct: 246 SDLRPLRLSRTLLWLSIDSLPEHNGEQVTALRGIPADKLANYRERFAQGLY-ADLLVDLE 304

Query: 305 KSVSASPFWIRGSFLAATAASRLAMGEVAEAIRAATARFVLRMPALQQLCFSDGRVFVDD 364
            S + +PFW+ G  LA      LA  +    +    A F+ R+P L++L F DG  F D 
Sbjct: 305 NSTARAPFWLDGQRLAWECLQELAAEQAMREVEIQLALFLQRLPRLEELRFHDGIPFADA 364

Query: 365 QCLAWLKG---------ADGQSEQAEAS----QEFTSLREELVSQLESGGVEPVLLRLQG 411
           +  AW+ G         A  + E+  A+      +    +E +  L   G++P + +L+ 
Sbjct: 365 ETRAWISGQVMPHVQRAATTRQEEPPAAGSVQPSWELALQEALPLLRKEGLKPAVQQLKQ 424

Query: 412 MQADFRAPRERCHTTLIAADLLAARGVSWLAQDLCAGVARTMQQTTASDWEPEV 465
             A  R  RER    L  A L        LA+     + + ++ +    WEP++
Sbjct: 425 GLARARGGRERFFWQLSLARLCYQAKKYELAKTQLEALDQQLEASGLGSWEPDL 478