Pairwise Alignments

Query, 1208 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

Subject, 1166 a.a., IcmF-related protein from Pseudomonas fluorescens FW300-N2E2

 Score =  380 bits (977), Expect = e-109
 Identities = 326/1228 (26%), Positives = 545/1228 (44%), Gaps = 108/1228 (8%)

Query: 5    WKYLKRWGWPLMTRIGLAMPLLLGLGAVLMLVAIWWLGPQWTWRDQQPLASVAHRSMASL 64
            + ++ RW  PL             LG + + + IW++GP   W   +       R  A +
Sbjct: 5    FSFMTRWVIPL-------------LGLIALSLIIWFVGPLLDWLVPEG------RRWALI 45

Query: 65   VFVLVALLSWLVVLRTRFRRLQAERQQAMAAEVDPTQPFVHAQEKALSQGLARYLDNA-- 122
            + V    +++ V    + RR  AE  +++AA+  P    +   E+   + L + +D A  
Sbjct: 46   ILVFAVWIAYRVFRIIQARRQAAEVMRSLAAQTPPDPTSIATAEEL--ETLRQRMDEALA 103

Query: 123  -------GG--RRALYRLPWYLVLGARQAGKSSFIDCTDQSFSLT-RIDKAQARGRPAQA 172
                   GG  RR LY LPWY+++G   +GK++ +  +   F L  ++     RG     
Sbjct: 104  LLKKAKLGGDERRNLYELPWYVIIGPPGSGKTTALVNSGLHFPLAAQLGAGAVRGVGGTR 163

Query: 173  LAYPVGWWISNDAVIIDPPGAFISQNGPADSLGSDSTDVESSVPSGTQAKLWQHLLDWLQ 232
                  WW ++ AV++D  G + +Q+       SD+T  +++         W   L  L+
Sbjct: 164  NC---DWWFTDQAVLLDTAGRYTTQD-------SDATIDKAA---------WLGFLGLLK 204

Query: 233  RNRSQRALNGLVLVVDLPALLHGTVEQRTALAHLLRTRLYEVSSQLGSRLPLYVVLSKFD 292
            + R++R ++G  + + L  LL G+  +R A A  +R R+ E+ +QLG R P+Y++L+K D
Sbjct: 205  KQRARRPIDGAFIAISLSDLLLGSDAERAAHAAAIRLRIQELYTQLGVRFPIYLMLTKLD 264

Query: 293  LLDGFDQFYSKLSAAKRNSLFGFTFKLDAVDTFDAWLGEYGEHYDRLLEQLFEQVIDRLD 352
            L+ GF +++  LS  +R  ++G TF LD   + D+ L      +  L ++L +++++RL 
Sbjct: 265  LVPGFMEYFDTLSKEERAQVWGMTFALDDGKSSDSPLAHLQSEFTGLEQRLNDRLVERLQ 324

Query: 353  VQGSPALRSRLYSLHRQLLGLRPMLLSFLRETLASDRFTTPALVRGVYWSSVVQHGDVRN 412
             +  PA R  +Y   +Q   L+  L SFL      + F    L+RGVY++S  Q G   +
Sbjct: 325  QERDPARRDLIYGFPQQFGALKDCLQSFLEGVFKPNAFEERVLLRGVYFTSGTQEGSPID 384

Query: 413  AFVREAAQPYKTSLPLLEGKPQAKALAYFIQQAFGRVIYKEAGLAGDNVRVARRKRQLLW 472
              +   AQ        L  +      +YFI++ F  V + E GL G + +V RR++   W
Sbjct: 385  RLIGSMAQSMNLDRQHL-ARQTGTGRSYFIEKLFTAVAFAERGLVGVDPKVERRRK---W 440

Query: 473  VGSSV---GVLAFCVAIASWHRYFDINGVKAASVLAKSREYSHHEVDQRLDPTGRNLLEP 529
            +   V    V+   V    W   +  N    A V  K       +  Q L P  R++L  
Sbjct: 441  IARGVLASTVVLVLVVSTLWWVSYRANQAYIAQVDQKVAPLG--QTVQNLSPAQRDVLAV 498

Query: 530  LDQIRDAVAVFGDYRAAWPGVADLGLYQGRTIGPTVDEAYLSLLSRRFLPALASGVIEAM 589
            L  + +AV    D   +W     LGLYQG  +       Y  LL   F P L + + E +
Sbjct: 499  L-PLLNAVKHLADDAPSW--AEGLGLYQGDMLEAESGSVYRKLLIAVFAPRLLTRIEEQL 555

Query: 590  DAAPPGSEQQMAALRVYRMLEDRRNRRAEWVEDWMARQWQQAFPGQ--GQLQRDLMRHLK 647
             +    S+     L+ Y ML D  +  A++++ W+A  W ++ P     + ++ L  HL+
Sbjct: 556  HSG-GNSDFLYEGLKAYLMLADTEHYDADFIKAWIALDWDRSLPRDLPAEQRQALTAHLQ 614

Query: 648  YALTYADTDLPQYRQR-VSHVQQTLRKVPLPQRVYAGLKQQAQEQLHTGLDLRHQVGPAF 706
             AL      L +  QR V  +++ L+++P+ QRVY  +K+Q          +    G   
Sbjct: 615  -ALFERRPPLARLDQRLVEDLRRQLQQLPVAQRVYDRIKRQKLPDGIPDFRINEAAGRDA 673

Query: 707  DVVYQLSSGSSQGDNGVLLAPMLTAKGFKEYFEPRSQRFTEMAMIDQWALGERAQLDYSD 766
             +V+   SG   G+    L+   T KG+++ F   S   T     +QW LG      +  
Sbjct: 674  ALVFSRKSGKPLGEP---LSGFFTVKGYRQGFLLTSLSQTGTLAEEQWVLG------FEQ 724

Query: 767  ADQ---AALNERLRNLYSADYIDSWRRALNAFSVADFRDLDHGVTILEQLAGPAAPLHRL 823
            ADQ   A+L   +R LY  DY+  W   L          +     +L  ++GP +PL +L
Sbjct: 725  ADQQNVASLAADVRRLYFQDYLRQWDALLADIDFVPITSVAQAADVLRVISGPTSPLKKL 784

Query: 824  LETVRDNSSLLSPVNVGVADEAPSPVSINSKPEQQQALV----------------IQRAF 867
            L  V   + L     +  A  AP    ++   E+  +L+                I   F
Sbjct: 785  LVAVAKETDLQQDERLLAAQGAPVEGGVDKLKERLGSLLGQEQSTQNAPAQSDDPITAHF 844

Query: 868  AGLSAMLHAAGEKPSYYDETHAAIVAVHDYAKAVQGSPDRGKAALHAVHQRFSMTGHDPI 927
            A L++++  +  +P+  D   A + A++    A+ G+   G A L     + +       
Sbjct: 845  AELNSIVSKSEGEPAAIDGLLADMNALYVQVSAMVGA--SGDALLGEAKNQATAAA---- 898

Query: 928  GTLQRVATGLPEPINHHVRKVAHQTAQVLNVEALRELERRWDAEVYSFFQQRLAERYPFV 987
              +   A   P  +   V+ V + T   +      +L   W +EV + ++Q LA RYP  
Sbjct: 899  TRVSLNAERQPPLVQGLVKSVVNSTTNSMMGGVRNQLNAAWTSEVVNIYRQSLAGRYPMS 958

Query: 988  V-RAPDASLEDFEAFFGPNGRLQQFQDQYLKLFLKDNLEA--LQNGLQGRSLIRTDVIEQ 1044
               A DA+L+DF  FFG  G +  +  +YL+ ++  +      Q G   +  I   V++ 
Sbjct: 959  PGSARDATLDDFGQFFGVGGVMDNYFRKYLQPYVDTSTPTWRWQPGAAQKLGIAPGVLQT 1018

Query: 1045 LERADRIRETFFDQRGNL-SVQFSIEPLGLSANQRTSLLDLDGQLISYTHGPSQITGIVW 1103
             +RA  IR+ FF   G    V+F ++P+ + +     LLDLDGQ +SY HGPS+ T + W
Sbjct: 1019 FQRAATIRDAFFRSGGTQPMVRFELKPVAMDSTITQFLLDLDGQQLSYDHGPSRPTAMQW 1078

Query: 1104 PNTLGQHVRSNLTLLRQNGNSSSLEYRGPWSMFRLLSRGALN-GRTATSVDLSFKTGDGV 1162
            PN     V     +   +   S +   GPW+ FRLL +  L  G +    +L  +     
Sbjct: 1079 PNPGSIGVVRISIMPPSSSGRSGITLDGPWAWFRLLEQSDLTAGNSPDRFNLRLRVDGAS 1138

Query: 1163 MRYRLNAEKAFNPITQQPFKGFRLPRGL 1190
              Y L A  AFNP   +   GF LP  L
Sbjct: 1139 ASYELRANSAFNPFKSRVLSGFSLPERL 1166