Pairwise Alignments

Query, 387 a.a., isovaleryl-CoA dehydrogenase from Pseudomonas putida KT2440

Subject, 389 a.a., isovaleryl-CoA dehydrogenase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  622 bits (1605), Expect = 0.0
 Identities = 300/385 (77%), Positives = 341/385 (88%)

Query: 3   YPSLNFALGETIDMLRDQVRTFVAAELAPRAAQIDHDNLFPADMWRKFGDMGLLGITVPE 62
           Y SLNF LGE +DMLRD V  F   E+AP AA++DHDN FP ++W   G MGLLG+TVPE
Sbjct: 5   YTSLNFGLGEDVDMLRDAVHDFAQHEIAPIAAKVDHDNAFPNEIWPVLGGMGLLGVTVPE 64

Query: 63  EYGGAGLGYLAHVVSMEEISRGSASVALSYGAHSNLCVNQINRNGTHEQKLKYLPKLISG 122
           EYGGA +GYLAHVV+MEEISR SAS+ LSYGAHSNLCVNQINRNG   QK KYLPKL+SG
Sbjct: 65  EYGGANMGYLAHVVAMEEISRASASIGLSYGAHSNLCVNQINRNGNAAQKAKYLPKLVSG 124

Query: 123 EHIGALAMSEPNAGSDVVSMKLRAEKRGDHYVLNGSKTWITNGPDANTYVIYAKTDLDKG 182
           EHIGALAMSEPNAGSDVVSMKL A K GD Y+LNG+K WITNGPDANTYVIYAKTDL KG
Sbjct: 125 EHIGALAMSEPNAGSDVVSMKLHARKEGDRYILNGNKMWITNGPDANTYVIYAKTDLTKG 184

Query: 183 AHGITAFIVERDWKGFSRSNKFDKLGMRGSNTCELFFDGVEVPAENILGQLNGGVRVLMS 242
           AHGITAFIVER +KGFS++ K DKLGMRGSNTCEL F+ VEVP ENILG LN GV+VLMS
Sbjct: 185 AHGITAFIVERGFKGFSQAQKLDKLGMRGSNTCELVFEDVEVPEENILGGLNNGVKVLMS 244

Query: 243 GLDYERVVLSGGPTGIMQSCMDLVVPYIHDRKQFGQSIGEFQLIQGKIADMYTQLNASRA 302
           GLDYERVVLSGGP GIM +CMD+VVPYIH+R+QFG+SIGEFQL+QGK+ADMYT +NA++A
Sbjct: 245 GLDYERVVLSGGPLGIMNACMDIVVPYIHEREQFGKSIGEFQLVQGKLADMYTGMNAAKA 304

Query: 303 YLYAVAQACDRGETTRKDAAGVILYTAERATQMALEAIQILGGNGYINEFPAGRLLRDAK 362
           Y+Y+VA++CDRGETTRKDAAG ILY+AE AT+MAL+AIQ+LGGNGY+NE+  GRLLRDAK
Sbjct: 305 YVYSVAKSCDRGETTRKDAAGAILYSAELATKMALDAIQLLGGNGYVNEYATGRLLRDAK 364

Query: 363 LYEIGAGTSEIRRMLIGRELFNETR 387
           LYEIGAGTSEIRRMLIGREL+NE++
Sbjct: 365 LYEIGAGTSEIRRMLIGRELYNESK 389