Pairwise Alignments

Query, 560 a.a., putative Long-chain-fatty-acid-CoA ligase from Pseudomonas putida KT2440

Subject, 550 a.a., AMP-binding domain protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  487 bits (1254), Expect = e-142
 Identities = 247/534 (46%), Positives = 346/534 (64%), Gaps = 2/534 (0%)

Query: 18  QTIGQAFDATVARCCDSEALVSRHQGLRYSWRQLAEQVEIYARALIALGVNTGDRVGIWS 77
           +T+GQ  D TVA+  D++A++   +  R ++RQ ++ V+  A+ L+ALGV  G++V +W+
Sbjct: 9   RTLGQILDETVAKYPDNDAVIYVDRDYRQTYRQFSQVVDDLAKGLMALGVRHGEKVAVWA 68

Query: 78  PNCAQWCILQLASAKVGAILVNINPAYRVGELEYVLRQSGCRWLVCAEAFKTSDYHTMVQ 137
            N   W  LQ A+AK+GAIL+ +N  YR  E+ Y+L QS C  L   + F+  DY   + 
Sbjct: 69  TNVPYWVALQFATAKMGAILLTVNTNYREHEIRYLLTQSECENLFIIDGFRDHDYVQTIY 128

Query: 138 ELVPELASAAPGELASECLPELRGVISLAANPPAGFLPWHAFAERAGQTSVEACTARQQS 197
            ++PEL +   G+L    LP L+ V+ L A    G          +   S E    RQ++
Sbjct: 129 NMIPELKTQPRGQLRCSSLPHLKRVMFLGAEKHRGMYSVPEIISMSAMVSDEEYAERQRA 188

Query: 198 LQFDQPVNIQYTSGTTGAPKGATLSHYNILNNGFMVGESLGLTARDRMVIPVPLYHCFGM 257
           L     VN+QYTSGTTG PKG  L+H NI NNG+ +G++   T +DR+ +PVPL+HCFG 
Sbjct: 189 LDPHDVVNMQYTSGTTGFPKGVMLTHVNIGNNGYWIGKNQHFTEKDRVCLPVPLFHCFGC 248

Query: 258 VMANLGCITHGSTMIYPNDAFDAELTLRAVAEERATILYGVPTMFIAMLDHPSRAHMDLS 317
           V+  L  I HG+ ++   ++F     + +V +E+ T LYGVPTMF+A+L+H      D S
Sbjct: 249 VLGVLAAINHGAALVI-LESFSPMHVMASVDQEKCTALYGVPTMFLAVLEHKLFERFDFS 307

Query: 318 TLRSGIMAGATCPIEVMRRVIDQMHMAEVQIAYGMTETSPVSLQTGPDDDLELRVTTVGR 377
           +LR+GIMAG+ CP  +MRRV+++M+M E+ I YG+TE SPV  Q+   D  E RV TVGR
Sbjct: 308 SLRTGIMAGSVCPEPLMRRVVEKMYMREITICYGLTEGSPVMTQSLVTDPFERRVQTVGR 367

Query: 378 TQPQLENKLVDAD-GCIVPRGEIGELCTRGYSVMLGYWDNPQATADAIDPAGWMHSGDLA 436
             P +E ++VD D    VPRG  GE+  RGY+VM GY++ P+AT  AID  GW+HSGDL 
Sbjct: 368 AMPCIEVRIVDPDTNEEVPRGTQGEVVCRGYNVMKGYYNMPEATTAAIDADGWLHSGDLG 427

Query: 437 VMDEQGYVRIVGRNKDMIIRGGENIYPRELEEFFYTHPAVADAQVIGIPCSRYGEEIVAW 496
           VMDE+GYV I GR KDMIIRGGENIYPRE+EEF Y    V D QV+G+   +YGEE+ A+
Sbjct: 428 VMDEEGYVVITGRIKDMIIRGGENIYPREIEEFLYGMDGVQDVQVVGVNSRKYGEEVGAF 487

Query: 497 IKLHPGHSATVEELQGWCKARIAHFKVPRYIRFVDEYPMTVTGKVQKFRMREIS 550
           I   PG     E+++ +C+ RIA  KVPRYI F+D YPMT +GK+QKF++RE++
Sbjct: 488 IIPKPGVEMAPEDVRDYCRGRIAWHKVPRYISFIDAYPMTASGKIQKFKLREMA 541