Pairwise Alignments

Query, 771 a.a., type 6 secretion system protein from Pseudomonas putida KT2440

Subject, 706 a.a., type VI secretion system Vgr family protein from Marinobacter adhaerens HP15

 Score =  439 bits (1130), Expect = e-127
 Identities = 252/645 (39%), Positives = 362/645 (56%), Gaps = 56/645 (8%)

Query: 19  FEVVSFKLDETLNQPFVLNLELVSYESDIDFGHVLDKPALFTLYSADRPLRHVHGLVSAF 78
           F +V F L E L++ F   LEL S +  I    +L++P    ++    PLR   G+V+ F
Sbjct: 21  FSLVGFTLTECLSEVFHGRLELASTDPSIQAAEILEQPVDLVVWQDGEPLRRFTGVVNEF 80

Query: 79  SQGETGFCRTRYHAVVEPQLARARLRSNWRIFQQKTVPQILELMFKRQGI--TRFELKSS 136
            +G+ G  RTRY   ++  L R  L  N RIFQ ++   I   + + +GI  + F+LK +
Sbjct: 81  VRGDAGHRRTRYELNIQSPLWRLGLMHNSRIFQTQSSDTIARTLLEERGIIDSVFDLKRT 140

Query: 137 AQHQVREFCVQAGETDLDFIHRLAAEEGFVYRFEHCARQHTLIVTDRLLSFGLLSRGALK 196
            +   RE+CVQ  E+DL F+ RLAAEEG+ YR+EH                     G++ 
Sbjct: 141 PEQ--REYCVQHRESDLAFLERLAAEEGWHYRYEH---------------------GSVD 177

Query: 197 AEDDEALWLDEDDVGPDKVL---YHASSGGDQARACLRRLRYCEQVRTARQVQRDYTFTN 253
           A+   AL + +      K+    Y A +GG   R  + R RY E+VR A    +DYTF N
Sbjct: 178 ADTQPALVIADHHGDAPKLEPAEYKARAGGSSRRPVVYRFRYEERVRVASVAMKDYTFKN 237

Query: 254 PAYRQEHKAQTSGVTHQSLDYERFDYPGRYKRDAVGKPFTETRLTALRHDACLAEVQGDD 313
           PAY   H+  +  + H+  DY+ +DYPGR+K DA G+PFTE RL +LR+DA  A  + + 
Sbjct: 238 PAYALMHQHASGDLKHRE-DYQHYDYPGRFKADASGQPFTEARLQSLRNDASTASGESNR 296

Query: 314 VRLQTGLSFTLVGHPREDLNVHWRVISLCHEGTQLTSLQEEAAGAEQGTRYVNDALLVQG 373
                G    L  H  + LN  W + ++ H GTQ  +L+EE  G  + T Y N    +  
Sbjct: 297 PDFSAGAKVELKEHDSDALNREWLLTAVTHTGTQPQALEEE--GGSEPTTYHNRFNAIPA 354

Query: 374 MAEWRPAPMAKPRIDGPHMATVVGPPGEEIYCDEWGRVKVSFPWDRESKNNEFSSCWVWV 433
              WRP    +P +DGP +A V GP GEEI+CDE GRVKV FPWDR SKN+E SS W+ V
Sbjct: 355 DLTWRPRTPHRPLMDGPQIAIVTGPEGEEIHCDEHGRVKVRFPWDRYSKNDEHSSAWLRV 414

Query: 434 SQGWAGGSWGSMAIPRIGQDVIVQYVNGDPDQPMITGRTYCGDQLPPYDLPDHKTRMTIK 493
           SQGWAGG +G MA+PRIG +VIV +++GDPDQP+ITGRT+     PPY LP+HKTR T+K
Sbjct: 415 SQGWAGGQYGFMALPRIGHEVIVSFLDGDPDQPIITGRTHHITNTPPYGLPEHKTRTTLK 474

Query: 494 SQTHKGDGFNELRFEDELGRQEVFIHAERDQNNVVKHNETTLIGNDRSERVEHDEVVDIG 553
           ++THKG+G NELRFEDE  ++++++HA++D + + ++N T +I ND    VE++E   + 
Sbjct: 475 TKTHKGEGSNELRFEDEADQEQIYVHAQKDLDLLTENNRTEVIRNDSHRTVENNEFSHVK 534

Query: 554 GNRSVKVGASKRETVALGKVESIGLGKSLAVGGALSVMVGLEATEQVALDKRVQVGGQLR 613
           GN    V   +R        ES+G   SL++GG+L    G         ++ V+ G ++ 
Sbjct: 535 GNEHRTVDGEQR--------ESVGSDYSLSIGGSLHSKQG--------KNQLVEAGTEIH 578

Query: 614 VDADEDVSITSHHGHVHIDSRTSLTLSCGGAFIKLSDGRIEIGCP 658
             A   V          I++   LTL  GG+F+KL    + +  P
Sbjct: 579 HKAGMKVV---------IEAGAELTLKAGGSFLKLDPSGVTVSGP 614