Pairwise Alignments

Query, 455 a.a., NADP-dependent dihydropyrimidine dehydrogenase subunit from Pseudomonas putida KT2440

Subject, 468 a.a., glutamate synthase, small subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  187 bits (474), Expect = 8e-52
 Identities = 148/449 (32%), Positives = 214/449 (47%), Gaps = 24/449 (5%)

Query: 15  ADQLAERFSDLAPPLTARQAALESARCLYCYDAPCVNACPSEIDIPSFIHRISDENLQGA 74
           A + + +F ++  P    Q + ++ RCL C +  C   CP    IP+++       +  A
Sbjct: 20  AAKRSTQFIEIYQPFAQAQVSEQADRCLDCGNPYCEWKCPLHNYIPNWLKLAQQGRIMEA 79

Query: 75  AERILSANILGGSCARVCPTEILCQQACVRNNAQECAPVLIGQLQRYALDNAQFSAHPFK 134
           A+ +   N L   C RVCP + LC+ AC  N   +   V IG +++Y  D A        
Sbjct: 80  ADLVHETNTLPEICGRVCPQDRLCEGACTLN--ADFGAVTIGNVEKYITDTAIAQGWRPD 137

Query: 135 RSAATGK--RIAVVGAGPAGLSCAHRLAMHGHDVVVFEACDKAGGLNEYGIARYKLVDDY 192
            S  T +  ++A+VGAGPAGL CA  LA +G   VVF+   + GGL  YGI  +KL    
Sbjct: 138 MSKVTPRKEKVAIVGAGPAGLGCADILARNGVKAVVFDKYPQIGGLLTYGIPAFKLDKAV 197

Query: 193 AQREVDFLLGIGGIEVRHGQRLGGNLSLGELRDQYDAVFLGLGLNAVRQLGLPDEEAPGV 252
                  L G+ GIE + G  +G +++  +L ++YDAVFLG+G     + GL  E+A GV
Sbjct: 198 MATRRTVLEGM-GIEFKLGVTVGKDVAFNQLLEEYDAVFLGMGTYTAMKAGLEGEDAQGV 256

Query: 253 VAATEYI----REL--RQADDLSQLPLA-DRCLVIGAGNTAIDMAVQMSRLGARDVNLVY 305
             A  Y+      L    + D+  L LA  R +V+G G+TA+D      R GA  V   Y
Sbjct: 257 YQALPYLIGNTHHLMGSTSPDMPYLNLAGKRVVVLGGGDTAMDCVRTAVRQGASSVICAY 316

Query: 306 RRGHADMGATGHEQDIAKANQVRLHTWARPDAVLLDDAGKVRGMRFARTEL----AEGRL 361
           RR  A+M  +  E   A+   V      +P A+   D GKV G+    T++    A GR 
Sbjct: 317 RRDEANMPGSRREVQNAREEGVNFLFNRQPVAIKTQD-GKVLGVECVETQMGKADASGRQ 375

Query: 362 RD---TGETFELAADAIFKAIGQRFDDASLGDPVAAQLAREGE---RIRVDENLQTSLPG 415
           R     G    L ADA+  A G +   A        +L + G      + D   QT+ P 
Sbjct: 376 RAEAIVGSEQLLEADAVIIAFGFQPSPAPWFADYGIELDQWGRVKASKQADNPFQTTNPK 435

Query: 416 VYAGGDCTALGQDLTVQAVQHGKLAAEAI 444
           V+AGGD    G DL V A+  G+ AA+ I
Sbjct: 436 VFAGGDMVR-GSDLVVTAIAEGRDAAQGI 463