Pairwise Alignments

Query, 455 a.a., NADP-dependent dihydropyrimidine dehydrogenase subunit from Pseudomonas putida KT2440

Subject, 763 a.a., NADPH-dependent glutamate synthase small chain (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  199 bits (507), Expect = 2e-55
 Identities = 139/437 (31%), Positives = 217/437 (49%), Gaps = 23/437 (5%)

Query: 29  LTARQAALESARCLYCYDAPCVNACPSEIDIPSFIHRISDENLQGAAERILSANILGGSC 88
           LTA QA  E+ RCL C +  C+  CP  IDIP FI  I       AA+ +   + L   C
Sbjct: 330 LTAEQAVTEAKRCLDCANPGCMEGCPVGIDIPRFIKNIERGEFLEAAKTLKETSALPAVC 389

Query: 89  ARVCPTEILCQQACVRNNAQECAPVLIGQLQRYALD----NAQFSAHPFKRSAATGKRIA 144
            RVCP E  C+  C+     E  PV IG L+R+A D    + Q S      +   G ++A
Sbjct: 390 GRVCPQEKQCESKCIHLKMNE-KPVAIGYLERFAADFERESGQISVPVI--AEKNGIKVA 446

Query: 145 VVGAGPAGLSCAHRLAMHGHDVVVFEACDKAGGLNEYGIARYKLVDDYAQREVDFLLGIG 204
           V+G+GPAGLS A  +A +G+DV VFEA  + GG+ +YGI  ++L +     E+D L+ +G
Sbjct: 447 VIGSGPAGLSFAGDMAKYGYDVTVFEALHEIGGVLKYGIPEFRLPNKIVDVEIDNLVKMG 506

Query: 205 GIEVRHGQRLGGNLSLGELRDQ-YDAVFLGLGLNAVRQLGLPDEEAPGVVAATEYIRELR 263
              ++    +G  +S+ +L+++ +  +F+  G      + +P E +  ++++ EY+  + 
Sbjct: 507 VTFIK-DCIVGKTISVEDLKEEGFKGIFVASGAGLPNFMNIPGENSINIMSSNEYLTRVN 565

Query: 264 QADDLSQ-----LPLADRCLVIGAGNTAIDMAVQMSRLGARDVNLVYRRGHADMGATGHE 318
             D  S+     +       VIG GNTA+D      RLGA    ++YRR   +M A   E
Sbjct: 566 LMDAASEDSDTPVAFGKNVAVIGGGNTAMDSVRTAKRLGAERAMIIYRRSEEEMPARIEE 625

Query: 319 QDIAKANQVRLHTWARPDAVLLDDAGKVRGMRFARTELAE----GR---LRDTGETFELA 371
              AK   V   T   P   + D+ G V+ +   + EL E    GR   +   G T  + 
Sbjct: 626 VKHAKEEGVEFLTLHNPIEYIADEQGCVKQVILQKMELGEPDASGRRSPVAIPGATETID 685

Query: 372 ADAIFKAIGQRFDDASLGDPVAAQLAREGERIRVDENLQTSLPGVYAGGDCTALGQDLTV 431
            D    ++G   +          +L R+G  I VD+N+++S+P +YAGGD    G    +
Sbjct: 686 IDLAIVSVGVSPNPIVPSSIKGLELGRKG-TIAVDDNMESSIPMIYAGGDIVR-GGATVI 743

Query: 432 QAVQHGKLAAEAIHAQL 448
            A+  G+ AA A++ QL
Sbjct: 744 LAMGDGRKAAAAMNEQL 760