Pairwise Alignments

Query, 496 a.a., putative PydP transporter, NCS1 nucleoside transporter family from Pseudomonas putida KT2440

Subject, 485 a.a., transporter transmembrane protein from Sinorhizobium meliloti 1021

 Score =  207 bits (528), Expect = 5e-58
 Identities = 150/488 (30%), Positives = 231/488 (47%), Gaps = 47/488 (9%)

Query: 29  YNPDIAPTKVHQRTWNKWHITALWVGMSICVPTYTLGGVLTAYFGLSVGEALLAILLANV 88
           YN D+AP K  +R W  + I  +W      +  Y L   L  + G S    LLAI + ++
Sbjct: 12  YNEDLAPAK--ERNWGAFSIFNVWTSDVHSLWGYYLAASLFLFCG-SFMNFLLAIGIGSL 68

Query: 89  IVLIPLTLNAFPGTKYGIPFPVLLRSSFGILGSNVPCLIRAVVACGWFGIQTMFGGLAIH 148
           I+   + L    G + G+PFPVL R+SFGI G+N P ++RA+VAC W+G QT     AI 
Sbjct: 69  IIFFLMQLVGVAGVRTGVPFPVLARASFGIWGANFPAIVRAIVACFWYGAQTAAASGAIV 128

Query: 149 LFLG------SVFDGWKALG-GTGEVIGFMIFWCLNLWVVLRGAESIKWLETLSAPLLVA 201
             L               LG  T E++ +++ W L L ++  G E+++  +  + P   A
Sbjct: 129 ALLVRNESLLQFHQSSHMLGHSTLELVCYVVVWGLQLLIIQNGMETVRKFQDWAGP---A 185

Query: 202 VGVGLLFWAL-----------PHMSMTELLAQPPKRPEGASVVSYFCAGLTAMVGFWAT- 249
           V V +L  A+            H    + L +  K      V   F A L A+   W T 
Sbjct: 186 VWVMMLLLAIYLVVKAGGFSFSHTIPMDALLEKTKNAGVPGVPGSFAA-LGAVAAIWVTY 244

Query: 250 ---LSLNIPDFSRYARSQKDQILGQIFGLPLTMFLFAALGVVLTAASASLVGETVSDPVS 306
              L LN  DFSRY  S++   +G ++GLP+ + LF+ +  V T A+ ++ GE +  P  
Sbjct: 245 FSALYLNFCDFSRYCPSERSLKVGNLWGLPVNLILFSLVAGVTTIAAFNVYGEVLLHPDQ 304

Query: 307 LIGKIQSPFWVALAMALIVIATLSTNTAANIVSPTNDFQNIAPRLIGRSRAVWLTGFIGL 366
           +  K  S F   LA     +ATL  N  AN VSP  DF N+ P+ I   +  ++   I L
Sbjct: 305 ISAKFDSWFLALLAALTFAVATLGINVVANFVSPAFDFANVFPKHIDFKKGGYIAALIAL 364

Query: 367 ALMGHELLKKLGLIVSDLSLESVYSNWLLGYSSLLGPIAGIMVVDYFLIRRQKLDLAGLY 426
           AL                  E   ++++    + +GPI G+M+VDY+LIR+ ++D+  LY
Sbjct: 365 ALYPF------------APWEGGAAHFVNMIGNTMGPIFGVMMVDYYLIRKGRVDVEALY 412

Query: 427 RDD----VYPAWNWAGFAAFALPVGLTVMAIGNSSF--SWFYDYGWFTGSLLGGALYAAL 480
           R+D        W+     A  + +  + +  G +S   +W+  YGWF G  + GA+Y AL
Sbjct: 413 REDGEFRFENGWHVNALVAAGIGIVFSSILPGLTSVMPAWWGVYGWFFGVAIAGAIYYAL 472

Query: 481 GGLAARNP 488
               +  P
Sbjct: 473 RSFKSARP 480