Pairwise Alignments

Query, 319 a.a., Ribonuclease Z from Pseudomonas putida KT2440

Subject, 393 a.a., Ribonuclease Z from Synechococcus elongatus PCC 7942

 Score =  205 bits (521), Expect = 2e-57
 Identities = 120/312 (38%), Positives = 180/312 (57%), Gaps = 5/312 (1%)

Query: 1   MDLLFLGTSAGVPTKARNVSATAVIEASGSHWYLVDCGEGTQHRLLHTPLSIRDLRAIFI 60
           + + FLGTS+GVPT++RNVSA A+     +  +L DCGEGTQH+ L + L I  LR IF+
Sbjct: 1   LQVTFLGTSSGVPTRSRNVSAVALRLPQRAEVWLFDCGEGTQHQFLRSELRISQLRRIFV 60

Query: 61  THVHGDHCFGLPGLLASAGMSGRTQPLEVILPAVLHDWVRQGLVASDTFLPFELRLLPVE 120
           TH+HGDH FGL GLLAS G++G  + +++  P  L D+++     S T + + L++  V+
Sbjct: 61  THMHGDHVFGLMGLLASVGLAGNPERIDLYGPKPLRDYLQACAQHSRTHINYPLQIATVQ 120

Query: 121 ELIAWRSETLQVTTVQLSHRVPSVGFVFTEINPEPRLDIQRLDAEGITRGPLWGELAKGL 180
             + +    + V+   L HRVP+ G+   E +   R D+++  + GI  GP++ +L  G 
Sbjct: 121 PGVIYEDAEIVVSCAPLHHRVPAFGYRIQERDRPGRFDVEKARSLGIPPGPIYKQLKDGE 180

Query: 181 TVTY-DGQLLNGNDYLRPSRPPRRVIVCGDNDKPELLAAVARGADVLVHEATFTQAVVER 239
           TVT  DG+ ++G     P+   R ++ C D    E   A+A+ ADVL+HE+TF+    E 
Sbjct: 181 TVTLEDGRQIDGRQLCGPTERGRSMVYCTDTIFCESAIALAQDADVLIHESTFSDRDREM 240

Query: 240 TGGTFGHSTAAEVARFAEAAGVRNLVLTHFSARYQNDPRRSPHIDNVRDEALAHYSGQLT 299
                 H+TA   A  A+ AGVR L+LTHFS RY   P     +D++  EA A +  Q  
Sbjct: 241 AEQRL-HATATMAAEVAKQAGVRQLILTHFSPRYA--PGNEQTLDDLLAEAQAIFP-QTM 296

Query: 300 LAQDLQRYHLGR 311
           LA+D   Y + R
Sbjct: 297 LAKDFLSYDVPR 308