Pairwise Alignments

Query, 319 a.a., Ribonuclease Z from Pseudomonas putida KT2440

Subject, 308 a.a., ribonuclease Z from Methanococcus maripaludis JJ

 Score =  139 bits (350), Expect = 9e-38
 Identities = 98/322 (30%), Positives = 161/322 (50%), Gaps = 28/322 (8%)

Query: 1   MDLLFLGTSAGVPTKARNVSATAVIEASGSHWYLVDCGEGTQHRLLHTPLSIRDLRAIFI 60
           M + FLGT A +PTK R  +  ++        +L DCGE TQ +++ T +S   +  IFI
Sbjct: 1   MKITFLGTGAAIPTKYR--AHPSISLKFDGEIFLFDCGENTQRQIIFTDVSPMKINNIFI 58

Query: 61  THVHGDHCFGLPGLLASAGMSGRTQPLEVILPAVLHDWVRQGLVASDTFLPFELRLLPV- 119
           TH+HGDH  GLPGLL S    GR + L +  P+     +   +      + + + +  + 
Sbjct: 59  THLHGDHVLGLPGLLQSIAFQGRKKTLNIYGPSETAKMIEHIMGVGYHSIDYPINVYEIS 118

Query: 120 ----EELIAWRSETLQVTTVQLSHRVPSVGFVFTEINPEPRLDIQRLDAEGITRGPLWGE 175
               E++I+  +   +V +  + H VP++ +VF ++  +PR+D++++   GI  GP    
Sbjct: 119 SKTPEKIIS--TNNYEVFSYPVVHSVPALAYVFKQVK-KPRMDLEKVKKLGIEIGPDLKR 175

Query: 176 LAKGLTVTYDGQLLNGNDYLRPSRPPRRVIVCGD-------NDKPELLAAVARGADVLVH 228
           L  G  V  +G+++   D    S PP++ I  G        N+  E L  +    + L+H
Sbjct: 176 LKDGFNVELNGKIITPEDV---SLPPKKGICVGYSGDTIPLNEFAEFLKELK--CNTLIH 230

Query: 229 EATFTQAVVERTGGTFGHSTAAEVARFAEAAGVRNLVLTHFSARYQN-DPRRSPHIDNVR 287
           EATF +  +ER      HSTA +    A+ +GV  ++LTH SARY N D   S  ++   
Sbjct: 231 EATFDK-TMERNAKETLHSTATDALNIAKLSGVSTVLLTHISARYDNIDAFESEIVEFKS 289

Query: 288 DEALAHYSGQLTLAQDLQRYHL 309
           +    H    + +A+DL  Y L
Sbjct: 290 ENPEIH----VLIAEDLMEYPL 307