Pairwise Alignments

Query, 441 a.a., DNA-dependent ATPase required for recombination from Pseudomonas putida KT2440

Subject, 449 a.a., replication-associated recombination protein A from Vibrio cholerae E7946 ATCC 55056

 Score =  521 bits (1343), Expect = e-152
 Identities = 262/440 (59%), Positives = 326/440 (74%), Gaps = 6/440 (1%)

Query: 4   FRSEPVAQPLAARLRPSSLDEYVGQEHLLARGKPLREALEQGALHSMIFWGPPGVGKTTL 63
           F  +   +PLAAR+RP ++++Y+GQ+H+L  GKPLR ALE G +HSMI WGPPG GKTTL
Sbjct: 8   FSGDEDFRPLAARMRPQTVEQYIGQQHILGPGKPLRRALEAGHIHSMILWGPPGTGKTTL 67

Query: 64  ARLLAQFCDAHFETVSAVLAGVKEIRQAVEVAKQQAGQYGRRTILFVDEVHRFNKSQQDA 123
           A + A + +A  E VSAV +GVKEIR A+E A++     GRRTILFVDEVHRFNKSQQDA
Sbjct: 68  AEVAANYANAEVERVSAVTSGVKEIRAAIEKARENKLS-GRRTILFVDEVHRFNKSQQDA 126

Query: 124 FLPYVEDGTLLFIGATTENPSFELNNALLSRARVYVLKSLDEAALRKLVNRALTE-ERGL 182
           FLP++EDGT+ FIGATTENPSFELNNALLSRARVY L SL++  + + +++A+ + ERGL
Sbjct: 127 FLPHIEDGTVTFIGATTENPSFELNNALLSRARVYKLTSLNQQEILQALHQAIADTERGL 186

Query: 183 GKRNLRVGDDAFKMLMAAADGDGRRMLNFLENASDLAEDGSE----IDVEMLQSLLGDSR 238
           GK      D+    L    +GD R  LN+LE   D+A +  +    ID+ +L  + G+  
Sbjct: 187 GKVAAVFADNVLDRLAELVNGDARMSLNYLELLYDMAREDDQGRKQIDLPLLAEVAGEKV 246

Query: 239 RRFDKGGEAFYDQISALHKSVRGSNPDGALYWFARMLDGGCDPLYIARRVVRMASEDIGN 298
            RFD  G+ +YD ISA+HKS+RGS+PD ALYW ARM+  GCDPLYIARR++ +ASED+GN
Sbjct: 247 SRFDNKGDIWYDLISAVHKSIRGSDPDAALYWAARMISAGCDPLYIARRLLAIASEDVGN 306

Query: 299 ADPRALSLCLAAWDVQERLGSPEGELAVAQAITYLACAPKSNAVYVGFKTALREAAEHGS 358
           ADPR + + LAAWD   R+G  EGE A+AQAI YLACAPKSNAVY  +K AL +A     
Sbjct: 307 ADPRGMQVALAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAWKQALSDAHNLPE 366

Query: 359 LEVPLHLRNAPTKLMKQLGYGDEYRYAHDEPDAYAAGEDYFPDELEPRQYYQPVPRGLEL 418
            EVP HLRNAPT+LMK LGYG+EYRYAHDEP AYAAGE YFP E+   +YYQP PRGLE 
Sbjct: 367 FEVPPHLRNAPTRLMKDLGYGEEYRYAHDEPGAYAAGECYFPPEMSGTRYYQPTPRGLET 426

Query: 419 KIGEKLRHLADLDRNSPRQR 438
           KI EKL +LADL+  SP++R
Sbjct: 427 KIAEKLAYLADLNAKSPQKR 446