Pairwise Alignments

Query, 441 a.a., DNA-dependent ATPase required for recombination from Pseudomonas putida KT2440

Subject, 439 a.a., AAA ATPase, central region (NCBI) from Rhodospirillum rubrum S1H

 Score =  403 bits (1035), Expect = e-117
 Identities = 214/418 (51%), Positives = 277/418 (66%), Gaps = 7/418 (1%)

Query: 7   EPVAQPLAARLRPSSLDEYVGQEHLLARGKPLREALEQGALHSMIFWGPPGVGKTTLARL 66
           E   +PLA RLRP  L E VGQ+HL+    PL        L S++ WGPPG GKTT+ARL
Sbjct: 8   EAAPRPLADRLRPRQLAEVVGQDHLVGPDGPLGRMTAAHRLASVVLWGPPGCGKTTIARL 67

Query: 67  LAQFCDAHFETVSAVLAGVKEIRQAVEVAKQQAGQYGRRTILFVDEVHRFNKSQQDAFLP 126
           LA   D HFE +SAV AGV ++R+    A+++    GR T+LF+DE+HRFN++QQD FLP
Sbjct: 68  LADSTDLHFEPLSAVFAGVADLRKIFTAARERR-TVGRGTLLFIDEIHRFNRAQQDGFLP 126

Query: 127 YVEDGTLLFIGATTENPSFELNNALLSRARVYVLKSLDEAALRKLVNRALTEERGLGKRN 186
           YVEDGT++ +GATTENPSFELN ALLSR +V VL+ LD+AAL  L+ RA  E      R+
Sbjct: 127 YVEDGTVVLVGATTENPSFELNAALLSRCQVLVLRRLDDAALETLIARAEAE----CGRS 182

Query: 187 LRVGDDAFKMLMAAADGDGRRMLNFLENASDLAEDGSEIDVEMLQSLLGDSRRRFDKGGE 246
           L +  +  + L A ADGDGR +LN  E    L  +   +D   L  ++     ++DK  E
Sbjct: 183 LPLSAEGRETLRALADGDGRYLLNLAEELIALPAEPL-LDAAGLARVVQRRAPQYDKDRE 241

Query: 247 AFYDQISALHKSVRGSNPDGALYWFARMLDGGCDPLYIARRVVRMASEDIGNADPRALSL 306
             Y+ ISALHK++RGS+ D ALYW  RML GG DPLY+ RR+ R A EDIG ADP AL  
Sbjct: 242 GHYNLISALHKALRGSDTDAALYWMGRMLAGGEDPLYLLRRLTRFAVEDIGLADPDALRH 301

Query: 307 CLAAWDVQERLGSPEGELAVAQAITYLACAPKSNAVYVGFKTALREAAEHGSLEVPLHLR 366
            +AAWD  ERLGSPEGELA+A  + YL  APKSNA Y  +  A+R A + GSL  PLH+ 
Sbjct: 302 AVAAWDTYERLGSPEGELALANLVIYLGTAPKSNAAYKAYGAAMRAAKQTGSLMPPLHIL 361

Query: 367 NAPTKLMKQLGYGDEYRYAHDEPDAYAAGEDYFPDELEPRQYYQPVPRGLELKIGEKL 424
           NAPTK+MK+LGY   Y Y HD PD + +G++YFPD +  +++Y P  RG E ++ ++L
Sbjct: 362 NAPTKMMKELGYSQGYAYDHDAPDGF-SGQNYFPDGMARQRFYNPPERGFEREVRKRL 418