Pairwise Alignments

Query, 441 a.a., DNA-dependent ATPase required for recombination from Pseudomonas putida KT2440

Subject, 445 a.a., recombination factor protein RarA from Marinobacter adhaerens HP15

 Score =  564 bits (1454), Expect = e-165
 Identities = 281/440 (63%), Positives = 340/440 (77%), Gaps = 5/440 (1%)

Query: 3   LFRSEPVAQPLAARLRPSSLDEYVGQEHLLARGKPLREALEQGALHSMIFWGPPGVGKTT 62
           LF      +PLAAR+RP+SL++YVGQ HL+  GKPLR A+EQG LHSMI WGPPGVGKTT
Sbjct: 5   LFAESAGFRPLAARMRPASLNDYVGQAHLVGPGKPLRRAVEQGQLHSMILWGPPGVGKTT 64

Query: 63  LARLLAQFCDAHFETVSAVLAGVKEIRQAVEVAKQQAGQYGRRTILFVDEVHRFNKSQQD 122
            A+LLA   D  FETVSAVL+GVKEIR  VE A+ +    GR T+LFVDEVHRFNKSQQD
Sbjct: 65  FAQLLANVGDLSFETVSAVLSGVKEIRAVVERARNRKQSQGRDTLLFVDEVHRFNKSQQD 124

Query: 123 AFLPYVEDGTLLFIGATTENPSFELNNALLSRARVYVLKSLDEAALRKLVNRALTEERGL 182
           AFLP++EDGT +F+GATTENPSFELN+ALLSR RVYVLK+L+E  + +L+ RALT + G 
Sbjct: 125 AFLPHIEDGTFIFVGATTENPSFELNSALLSRTRVYVLKNLEEEDILQLLRRALTVDEGF 184

Query: 183 GKRNLRVGDDAFKMLMAAADGDGRRMLNFLENASDLAEDGS----EIDVEMLQSLLGDSR 238
           G R LRV +D   ++ AA+ GD RR LN LE A+DLAE        +  + L+ ++  S 
Sbjct: 185 GGR-LRVDEDVLTLMAAASGGDARRALNILEVAADLAEPDEAGTDRVTADQLEQVMQTSL 243

Query: 239 RRFDKGGEAFYDQISALHKSVRGSNPDGALYWFARMLDGGCDPLYIARRVVRMASEDIGN 298
           RRFDKGG+ FYDQISALHKSVRGS+PDG+LYW  RMLDGGCDPLY+ARR+VR+ASEDIGN
Sbjct: 244 RRFDKGGDVFYDQISALHKSVRGSDPDGSLYWLCRMLDGGCDPLYVARRLVRIASEDIGN 303

Query: 299 ADPRALSLCLAAWDVQERLGSPEGELAVAQAITYLACAPKSNAVYVGFKTALREAAEHGS 358
           AD RAL L + AWD QERLGSPEGELA+AQA+TYLA APKSNAVY  F   + +  +   
Sbjct: 304 ADTRALQLSMEAWDAQERLGSPEGELALAQAVTYLAMAPKSNAVYNAFNKCMADIRQDPD 363

Query: 359 LEVPLHLRNAPTKLMKQLGYGDEYRYAHDEPDAYAAGEDYFPDELEPRQYYQPVPRGLEL 418
            EVP+HLRNAPTKLMK +G+GD YRYAHDEP+A+AAGE Y P+ +  R+YY+PV RGLE+
Sbjct: 364 YEVPVHLRNAPTKLMKSMGHGDTYRYAHDEPEAFAAGESYLPEAIHQRRYYEPVNRGLEI 423

Query: 419 KIGEKLRHLADLDRNSPRQR 438
           K+ EK + L   +  SPR+R
Sbjct: 424 KLAEKRQRLDSRNAESPRKR 443