Pairwise Alignments

Query, 441 a.a., DNA-dependent ATPase required for recombination from Pseudomonas putida KT2440

Subject, 445 a.a., ATPase, AAA family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  516 bits (1328), Expect = e-151
 Identities = 255/436 (58%), Positives = 320/436 (73%), Gaps = 1/436 (0%)

Query: 4   FRSEPVAQPLAARLRPSSLDEYVGQEHLLARGKPLREALEQGALHSMIFWGPPGVGKTTL 63
           F   P  +PLAAR+RP ++ EY+GQ HLL  G+PLR+ALE G  HSM+ WGPPG GKTTL
Sbjct: 8   FNFAPDFRPLAARMRPRTIAEYIGQAHLLGEGQPLRQALEAGRAHSMMLWGPPGTGKTTL 67

Query: 64  ARLLAQFCDAHFETVSAVLAGVKEIRQAVEVAKQQAGQYGRRTILFVDEVHRFNKSQQDA 123
           A L+A + +AH E +SAV +GVK+IR A+E A+  A   G+RT+LFVDEVHRFNKSQQDA
Sbjct: 68  AELIAHYSNAHVERISAVTSGVKDIRGAIEQAQAIAQSRGQRTLLFVDEVHRFNKSQQDA 127

Query: 124 FLPYVEDGTLLFIGATTENPSFELNNALLSRARVYVLKSLDEAALRKLVNRALTE-ERGL 182
           FLP++EDGT++FIGATTENPSFE+NNALLSRARVY++K L +  +  ++ +AL + ERGL
Sbjct: 128 FLPFIEDGTVIFIGATTENPSFEINNALLSRARVYLIKRLSQDEIVHIITQALADTERGL 187

Query: 183 GKRNLRVGDDAFKMLMAAADGDGRRMLNFLENASDLAEDGSEIDVEMLQSLLGDSRRRFD 242
           G+R L +  D    L    DGD R+ LN LE  SD+  DG     EML  + G     FD
Sbjct: 188 GQRALNMPTDVLNKLAQLCDGDARKALNLLELMSDMVADGGTFTTEMLVQVAGHQVAGFD 247

Query: 243 KGGEAFYDQISALHKSVRGSNPDGALYWFARMLDGGCDPLYIARRVVRMASEDIGNADPR 302
           K G+ FYD ISA+HKS+RGS PD ALYWF R+L+GG DPLY+ARR++ +ASED+GNADP 
Sbjct: 248 KNGDQFYDLISAVHKSIRGSAPDAALYWFCRILEGGGDPLYVARRLLAIASEDVGNADPA 307

Query: 303 ALSLCLAAWDVQERLGSPEGELAVAQAITYLACAPKSNAVYVGFKTALREAAEHGSLEVP 362
           A+++ L AW+   R+G  EGE A+AQAI YLA APKSNAVY  FK A   A E G   VP
Sbjct: 308 AMTIALNAWECFHRVGPAEGERAIAQAIVYLASAPKSNAVYTAFKAARALARETGQEAVP 367

Query: 363 LHLRNAPTKLMKQLGYGDEYRYAHDEPDAYAAGEDYFPDELEPRQYYQPVPRGLELKIGE 422
            HLRNAPTKLM ++G+G EYRYAHDEP+AYA+GE+YFP+ L+  Q+Y P  RG E +I +
Sbjct: 368 YHLRNAPTKLMAEMGFGAEYRYAHDEPNAYASGENYFPESLKESQFYFPTERGFEKRIKD 427

Query: 423 KLRHLADLDRNSPRQR 438
           KL  LA LD+ S R+R
Sbjct: 428 KLVQLAQLDQASGRKR 443