Pairwise Alignments

Query, 441 a.a., DNA-dependent ATPase required for recombination from Pseudomonas putida KT2440

Subject, 447 a.a., recombination factor protein RarA from Klebsiella michiganensis M5al

 Score =  528 bits (1359), Expect = e-154
 Identities = 262/438 (59%), Positives = 333/438 (76%), Gaps = 6/438 (1%)

Query: 6   SEPVAQPLAARLRPSSLDEYVGQEHLLARGKPLREALEQGALHSMIFWGPPGVGKTTLAR 65
           S+   QPLAAR+RP +L +Y+GQ+HLLA GKPL  A+E G LHSMI WGPPG GKTTLA 
Sbjct: 9   SDNAFQPLAARMRPENLAQYIGQQHLLAPGKPLPRAIEAGHLHSMILWGPPGTGKTTLAE 68

Query: 66  LLAQFCDAHFETVSAVLAGVKEIRQAVEVAKQQAGQYGRRTILFVDEVHRFNKSQQDAFL 125
           ++A++  A  E +SAV +GVKEIR+A+E A+Q     GRRTILFVDEVHRFNKSQQDAFL
Sbjct: 69  VIARYASADVERISAVTSGVKEIREAIERARQNRNA-GRRTILFVDEVHRFNKSQQDAFL 127

Query: 126 PYVEDGTLLFIGATTENPSFELNNALLSRARVYVLKSLDEAALRKLVNRALTEE-RGLGK 184
           P++EDGT+ FIGATTENPSFELN+ALLSRARVY+LKSL    + +++++A++++ RG G 
Sbjct: 128 PHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLTSDDIEQVLSQAMSDKTRGYGG 187

Query: 185 RNLRVGDDAFKMLMAAADGDGRRMLNFLENASDLAEDGSE----IDVEMLQSLLGDSRRR 240
           +N+ + D+  K +    +GD RR LN LE  +D+AE  +     + VE+L  + G+   R
Sbjct: 188 QNIVLPDETRKAIADLVNGDARRALNTLEMMADMAESDASGNRVLKVELLTEIAGERSAR 247

Query: 241 FDKGGEAFYDQISALHKSVRGSNPDGALYWFARMLDGGCDPLYIARRVVRMASEDIGNAD 300
           FD  G+ FYD ISALHKSVRGS PD ALYW+AR++  G DPLY+ARR + +ASED+GNAD
Sbjct: 248 FDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNAD 307

Query: 301 PRALSLCLAAWDVQERLGSPEGELAVAQAITYLACAPKSNAVYVGFKTALREAAEHGSLE 360
           PRA+ + ++AWD   R+G  EGE A+AQAI YLACAPKSNAVY  FK A+ +A E    +
Sbjct: 308 PRAMQVAISAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAAMADARERPDYD 367

Query: 361 VPLHLRNAPTKLMKQLGYGDEYRYAHDEPDAYAAGEDYFPDELEPRQYYQPVPRGLELKI 420
           VP+HLRNAPTKLMK++GYG EYRYAHDEP+AYAAGE YFP E+   +YY+P  RGLE KI
Sbjct: 368 VPVHLRNAPTKLMKEMGYGQEYRYAHDEPNAYAAGEQYFPQEMAQTRYYKPTNRGLEGKI 427

Query: 421 GEKLRHLADLDRNSPRQR 438
           GEKL  L + D+NSP +R
Sbjct: 428 GEKLAWLTEQDQNSPIKR 445