Pairwise Alignments

Query, 223 a.a., substrate or modulator of FtsH-mediated proteolysis from Pseudomonas putida KT2440

Subject, 258 a.a., Integral membrane protein, interacts with FtsH from Phaeobacter inhibens DSM 17395

 Score = 57.8 bits (138), Expect = 2e-13
 Identities = 50/177 (28%), Positives = 78/177 (44%), Gaps = 20/177 (11%)

Query: 54  VFVVLIGFYGLFFLTNKLRDSAWGLVSTF-ALTGFMGFILGPILNRYLGMAGGAEVVSSA 112
           +F  L   +G+    N++  SA G+   F      MG  +  I   + G     E +   
Sbjct: 86  MFAPLAFVFGISAAANRM--SAAGVQLLFYVFATVMGLSISSIFLVFTG-----ESIVQV 138

Query: 113 FAMTALVFGGLSAYVLITRKDMSFLSGFITAGFFVLLGAVVASFFFQISGLQLAISAGFV 172
           F +T++ F GLS     T+KD+S +  F+  G   L+   +A+ F   S L   IS   V
Sbjct: 139 FLITSIAFAGLSLVGYTTKKDLSGMGAFLIMGLIGLIVLAIANMFIASSVLANVISFVGV 198

Query: 173 LFSSVCILFQTSAI-------IHGGERNY-----IMATISLYVSIYNLFVSLLQLFG 217
           L  +    + T  I        H G++ +     IM  +SLY+   N+F+ LLQL G
Sbjct: 199 LIFAGLTAYDTQRIKNEYLQHAHMGDQEWLGKAAIMGALSLYLDFINMFMMLLQLLG 255