Pairwise Alignments

Query, 510 a.a., transposase from Pseudomonas putida KT2440

Subject, 522 a.a., Mobile element protein from Pseudomonas fluorescens FW300-N2E2

 Score =  295 bits (756), Expect = 2e-84
 Identities = 174/509 (34%), Positives = 284/509 (55%), Gaps = 12/509 (2%)

Query: 1   MISMPENLPDDPVLLKQLLEQMIHERASDKSKIVHLEEEVALLRQRLFGRKTEQTGDAAT 60
           +I   E L      L + +E M  +   D++ I  L  E+A L++  F +++EQ      
Sbjct: 22  LIQRVETLDHQVDTLGKTVETMGKKINRDQTVIEKLTHEIAQLKRLKFAKRSEQMNPEQA 81

Query: 61  PQLPLFDEAESLAEPLDEADDEEVVAPT--KRRGKRKPLPADLPRIEVVHELPEHELTCA 118
             L    + +  A   +    + V+APT  K++ KR  L A+ PR  + HE       CA
Sbjct: 82  GLLDDLVDTDIAAIEAELQALQTVLAPTEKKQKPKRTALSAEFPRTLIHHEPDNTHCPCA 141

Query: 119 CGCRKHAIGEEVSEQLEIVPMQIRVIKHVRKVYGCRDCESAPVTADKPAQMIEKSMASPS 178
           C  ++  IGE+VSE+L+  P    V +H+R  + C DCE+  + A  PAQ+I+K + +  
Sbjct: 142 CALKR--IGEDVSEKLDYTPGVFTVERHIRGKWVCDDCETL-IQAPVPAQVIDKGIPTAG 198

Query: 179 VLAMLLTTKYVDGLPLHRFEKVLGRHGIDIPRQTLARWVIQCSEHFQPLLNLMRESLLKS 238
           +LA ++  K+ D LPL+R E + GR G+ IPR TLA+WV       QPL++ +R+ +L  
Sbjct: 199 LLAHVMIAKFADHLPLYRQESIFGRAGLAIPRSTLAQWVGVTGVQLQPLVDALRDVVLGQ 258

Query: 239 RIIHCDETRVQVLKEPGREPSSQSWMWVQTGGP-PDRPVILFDYATSRAQEVPVRLLDGY 297
           ++IH DET VQ+L  PG + + +S++W  T     +   +++D++ SRA E     L  +
Sbjct: 259 QVIHADETPVQMLV-PGSKKTQRSYVWAYTTSQFSNLAAVVYDFSPSRAGEHARNFLQDW 317

Query: 298 RGYVMTDDYAGYNALAAQDGLERLGCWAHARRKFVEAQKVQPKGKTGRADIALNLINKLY 357
           +  ++ DD+ GY A + + G+  +GC AHARRKF E   +    K+  A+ AL  I  LY
Sbjct: 318 KCKLVCDDFGGYKA-SFELGVTEIGCMAHARRKFFE---LHATNKSTLAEQALRYIQLLY 373

Query: 358 GVERDLKDSDDEDRKVARMERSLPLLTQLKNWVEKTQPQVTTQNALGKAIGYLASNWSKL 417
            +E +++D + + R+  R ER++P++  L  W+   +  V   +A+ +A+ Y    W+ L
Sbjct: 374 EIESEVRDLEPDLRRRIRQERAVPVMDMLHAWMIAQRDLVPEGSAISRALDYSLKRWAAL 433

Query: 418 ERYVEHGYLPMDNNAAERAIRPFVIGRKNWLFSDTPRGATASAQLYSLVETAKANGQEPY 477
            RY++ G +P+DNN  E  IRP+ +GRKNWLF+ + R    +A + SL+++A+ NG +PY
Sbjct: 434 SRYLDDGDVPIDNNWCENQIRPWALGRKNWLFAGSLRSGKRAAAIMSLIQSARLNGHDPY 493

Query: 478 AWLRHALERLPQAASVEDYEALLPWNCKP 506
           A+L+  L RLP      D + LLP    P
Sbjct: 494 AYLKDVLTRLP-TQHASDIDQLLPHQWTP 521