Pairwise Alignments

Query, 510 a.a., transposase from Pseudomonas putida KT2440

Subject, 246 a.a., transposase number 3 for insertion sequence ISRM28 from Sinorhizobium meliloti 1021

 Score =  108 bits (271), Expect = 2e-28
 Identities = 74/219 (33%), Positives = 109/219 (49%), Gaps = 15/219 (6%)

Query: 5   PENLPDDPVLLKQLLEQMIHERASDKSKIVHLEEEVALLRQRLFGRKTEQTGDAATPQLP 64
           P+ LP D   L +++  +  E A  K+++  LE +       LFG K+E+   A  P   
Sbjct: 5   PDPLPQDAAQLSRIILSLDAENADLKARVAFLEGQ-------LFGPKSEKM-TAIDPTQA 56

Query: 65  LFDEAESLAEPLDEADDEEVVAPTKRRGKRKP------LPADLPRIEVVHELPEHELTCA 118
             +  +    P    DD   VA   R+ +R P      LP  LPR E + E PE ++   
Sbjct: 57  TLELGDLSDIPEAANDDVAPVAEGPRQERRSPSRNIGRLPKHLPRYEELIE-PESKICPC 115

Query: 119 CGCRKHAIGEEVSEQLEIVPMQIRVIKHVRKVYGCRDCESAPVTADKPAQMIEKSMASPS 178
           C    H IG ++SE L+IVP  +RV + +R  Y CR CES  V A  PA+M++  M + +
Sbjct: 116 CSFELHCIGTDISEALDIVPAVVRVKRTIRPRYACRACESVIVQAPAPARMMDGGMVTTA 175

Query: 179 VLAMLLTTKYVDGLPLHRFEKVLGRHGIDIPRQTLARWV 217
             A +  +K+   LPLHR  ++L   G+ I R TL  WV
Sbjct: 176 FAAHIAVSKFAWHLPLHRQAQMLASCGVIIDRGTLGAWV 214