Pairwise Alignments

Query, 510 a.a., transposase from Pseudomonas putida KT2440

Subject, 545 a.a., Transposase from Sinorhizobium meliloti 1021

 Score =  239 bits (611), Expect = 1e-67
 Identities = 172/539 (31%), Positives = 258/539 (47%), Gaps = 41/539 (7%)

Query: 1   MISMPENLPDDPVLLKQLLEQMIHERASDKSK-------IVHLEEEVALLRQRLFGRKTE 53
           M +  +NLPDDP  LK ++  +  E A   +        I  L   +A L++++FG+ +E
Sbjct: 6   MSNASQNLPDDPAFLKAMIAALQAENAKMSATLQAHDQLIGELRLRIAKLKKQVFGKSSE 65

Query: 54  QTGDAATPQLPLFDE------AESLAEPLDEADDEEVVAPTKRRGKRKPLPADLPRIEVV 107
           +  +    QL L  E      AE+  +PLDE D     AP   R ++       PR+   
Sbjct: 66  KI-EREIQQLELALEDLLIAAAENSTKPLDEVDAAVPAAPVASRPEKTMRRR--PRVSEK 122

Query: 108 HELPEHEL---TCA--CGCRKHAIGEEVSEQLEIVPMQIRVIKHVRKVYGCRDCESAPVT 162
                 EL   TC   CG     +GE+ SE L+++  Q++VI+  R    CR CE   V 
Sbjct: 123 AARERKELDPGTCCPDCGGELRLVGEDASEILDMIAAQMKVIEVARLKKSCRCCEKM-VQ 181

Query: 163 ADKPAQMIEKSMASPSVLAMLLTTKYVDGLPLHRFEKVLGRHGIDIPRQTLARWVIQCSE 222
              P++ I  SMA   +LA +L +K+ D LPL+R  ++  R G DIP  TL  W  +  +
Sbjct: 182 LPAPSRPIPGSMAGAGLLAYILVSKFDDHLPLYRLNEIFARMGADIPDSTLVDWCGRAMQ 241

Query: 223 HFQPLLNLMRESLLKSRIIHCDETRVQVLKEPGREPS-------SQSWMWVQTGGP---P 272
             QPL+  +   ++ S ++H D+T ++VL    R+          + W +V+   P    
Sbjct: 242 VLQPLIERIEAVVMSSDLLHADDTPIRVLDRSLRDKGLGKGVKKGRIWTYVRDQRPWAGA 301

Query: 273 DRPVILFDYATSRAQEVPVRLLDGYRGYVMTDDYAGYNAL--AAQDGLERL---GCWAHA 327
             P  ++ +A    +E     L    G +  D Y GY  L     DG+ R     CWAH 
Sbjct: 302 APPGAVYYFAPDWKEEHVHHHLRQTSGILQADGYKGYGKLYEPGADGIGRFREAACWAHW 361

Query: 328 RRKFVEAQKVQPKGKTGRADIALNLINKLYGVERDLKDSDDEDRKVARMERSLPLLTQLK 387
           RR F +   +    K+  A  AL+ I  LY +ERD+     + R  AR + S   +  L+
Sbjct: 362 RRDFHD---IWTSNKSEIAREALDRIGALYDIERDIAGQPADIRLAARQKHSTAKVEALR 418

Query: 388 NWVEKTQPQVTTQNALGKAIGYLASNWSKLERYVEHGYLPMDNNAAERAIRPFVIGRKNW 447
            W E    ++  +  L  A  Y  S W     ++E G + MDNNAAERA+RP  IGRKNW
Sbjct: 419 VWAEAQLTRIPGKGDLASAFRYGLSRWHSFCLFLEDGRVAMDNNAAERALRPIGIGRKNW 478

Query: 448 LFSDTPRGATASAQLYSLVETAKANGQEPYAWLRHALERLPQAASVEDYEALLPWNCKP 506
           LF+    GA   A+  +++ETAK NG +P A+L   L+R+     +   + LLPWN  P
Sbjct: 479 LFAGADTGAETLARAMTIIETAKMNGIDPQAYLADVLDRI-HDHKINRLDELLPWNWAP 536