Pairwise Alignments

Query, 510 a.a., transposase from Pseudomonas putida KT2440

Subject, 550 a.a., protein in ISRm14 from Sinorhizobium meliloti 1021

 Score =  250 bits (638), Expect = 1e-70
 Identities = 169/498 (33%), Positives = 254/498 (51%), Gaps = 35/498 (7%)

Query: 30  KSKIVHLEEEVALLRQRLFGRKTEQTGDAATPQLPLFDEAESLAEPLDE----------- 78
           K  I  LE +V   R+  FG K+E+  D A  +L L D   ++AE               
Sbjct: 53  KELIEKLEGQVHDYRRTKFGPKSEKL-DPAQMELALEDLETAIAETQARIAAVEKKIEAS 111

Query: 79  ADDEEVVAPTKRRGKRKPLPADLPRIEVVHELPEHELTCACGCRKHA-IGEEVSEQLEIV 137
           A D + VAP K R K + LP  LPR+E V E PE  + C CGC     IGE+ +E+L+ +
Sbjct: 112 ASDPDKVAPRKER-KARALPEHLPRVERVIE-PE-SIVCPCGCGNMVRIGEDRTERLDRI 168

Query: 138 PMQIRVIKHVRKVYGCRDCESAPVTADKPAQMIEKSMASPSVLAMLLTTKYVDGLPLHRF 197
           P +  VI  +R  Y C    +  V A  PA ++E S  + ++LA +  +K+ + +PL+R 
Sbjct: 169 PARYEVIVTIRPKYACPKGRTGVVQARAPAHLLEGSWPTEALLAEIAVSKHSEHMPLNRQ 228

Query: 198 EKVLGRHGIDIPRQTLARWVIQCSEHFQPLLNLMRESLL-KSRIIHCDETRVQVLKEPGR 256
            +V+ RHG+ I R  LA W+ +      P+++ M + LL +S  ++ DET   VL +PGR
Sbjct: 229 AEVMARHGVPIDRTVLADWMGRTGSEIAPVVDHMAKRLLWESTRLYVDETTAPVL-DPGR 287

Query: 257 EPSSQSWMWVQ-------TGGPPDRPVILFDYATSRAQEVPVRLLDGYRGYVMTDDYAGY 309
             +   ++W          G  P  P ++F Y   R  E    +LDG+ G +  D Y GY
Sbjct: 288 GKTKTGYLWAVLRDDRGWNGSAP--PGVVFHYRPGRKGEYAAEILDGFNGTIQVDAYGGY 345

Query: 310 NALAAQDG-----LERLGCWAHARRKFVEAQKVQPKGKTGRADIALNLINKLYGVERDLK 364
           + LA  D      L+   CWAH RRK ++A    PK  +   D AL  I  LY +E  ++
Sbjct: 346 SHLATLDRVGGDPLKLAFCWAHGRRKLIKAT---PKSGSPIVDEALVRIAALYKIEDSIR 402

Query: 365 DSDDEDRKVARMERSLPLLTQLKNWVEKTQPQVTTQNALGKAIGYLASNWSKLERYVEHG 424
            SD E R+  R E SLPL+     W+     +V+ ++ LGKA+ Y+ +       +++ G
Sbjct: 403 GSDPEHRRAVRQELSLPLVDAFFAWLAAQAKRVSRKSDLGKALAYMLTRQDGFRLFLDDG 462

Query: 425 YLPMDNNAAERAIRPFVIGRKNWLFSDTPRGATASAQLYSLVETAKANGQEPYAWLRHAL 484
           ++ +D+N  E AIR   + R+N LF+    G    A+  SL+ T K NG EPYA+L    
Sbjct: 463 HVDIDSNLVENAIRRPAMNRRNALFAGHDEGGRNWARFASLIGTCKMNGVEPYAYLCDLF 522

Query: 485 ERLPQAASVEDYEALLPW 502
            RL      +D +AL+PW
Sbjct: 523 TRLANGHLAKDIDALMPW 540