Pairwise Alignments

Query, 675 a.a., permease from Pseudomonas putida KT2440

Subject, 458 a.a., TRAP transporter, DctM subunit from Pseudomonas stutzeri RCH2

 Score = 67.0 bits (162), Expect = 2e-15
 Identities = 92/356 (25%), Positives = 146/356 (41%), Gaps = 45/356 (12%)

Query: 170 LYGTPTYVSATYIYLFILFGAFLEQAGMIRLFTDFAMGLFGHRSGGPAKVSVFSSALMGT 229
           ++G     +   + LF+  G  LE++ +     +    LFG   GG A       AL+  
Sbjct: 56  IFGIMNNQTMLAVPLFVFMGVMLEKSRVAEDLLESMSRLFGTMRGGLAISVCVVGALLAA 115

Query: 230 ITGSGVANVVTTGQFTIPLMKRFGYKPAFAGGVEATSSMGSQLMPP-----VMGAV---A 281
            TG   A VVT G   +P M R GY PA A G  A +    Q++PP     ++G V   A
Sbjct: 116 STGIVGATVVTMGLLALPTMLRRGYDPAIATGTLAATGTLGQIIPPSIILVLLGDVMSSA 175

Query: 282 FIMAE-------TINVPYAEVAKAALIPALLYFGS--VYWMVHLEARRSHLHGLPREQC- 331
           F  A+          V   ++   ALIP LL  G   +Y +     +   L  LP+E+  
Sbjct: 176 FQQAQLKMGIFSPKTVSVGDLFVGALIPGLLLVGMYILYLIAVAIFQPKKLPALPQEELG 235

Query: 332 PSAWDALRQRWFLLVPLMVLVALLFSGRTPLYSGMVGLALTAIVILGSAIILRAQKTWLR 391
           P  W  L     LL PL ++ A+L S    + +G       A +    A +L   K  L 
Sbjct: 236 PIEWGKLIGS--LLPPLALITAVLGS----ILAGYATPTEAAAIGALGATLLSIAKGQLN 289

Query: 392 AAFWVALGILCSGFFRMGIGVILMVIAGLAIACCFVQGGRATLHACVMALAEGARHAVPV 451
              +  L  +  G   +   V L++I     +  F   G          L E A H++P 
Sbjct: 290 ---FTQLKQVAFGTTEITSMVFLILIGASLFSLVFRGFGGE-------VLIEDALHSLPG 339

Query: 452 GIACALVGVIIGVISLTGLATTFAGYILDLGRDNLFLSLVLTMLTCLVLGMGIPTI 507
           G+  A + V++ +  L        G+ILD       + +V+ ++  ++L MG+  +
Sbjct: 340 GVLGAFLVVMLVIFLL--------GFILDFIE---IIFVVVPIVGPILLAMGLDPV 384