Pairwise Alignments

Query, 675 a.a., permease from Pseudomonas putida KT2440

Subject, 713 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  237 bits (604), Expect = 2e-66
 Identities = 166/494 (33%), Positives = 248/494 (50%), Gaps = 56/494 (11%)

Query: 75  LLGLAGMATAAYQWYFEGDLIQRSGELTTSDLIVGLLLIGLVFEAARRVMGIALPIICAL 134
           LL L  +A   Y    E  L +R  +  TSD +  +L I +V E  RR MG  +P +  +
Sbjct: 86  LLALLALACLIYLMLAEDALYERGVKFVTSDWVFSILAILIVMEMIRRTMGWFIPTLILI 145

Query: 135 FLAY-GLLGQHLPGELAHRGYGLDQIVNQLAFGTEGLYGTPTYVSATYIYLFILFGAFLE 193
            L Y  + G+   G     G   + ++ +  + +EG++G+   +S +++++FILFGAFL 
Sbjct: 146 CLTYVSVWGKWAGGIFHFPGLSAETLLYRSFYSSEGMFGSIAAISWSFVFMFILFGAFLV 205

Query: 194 QAGMIRLFTDFAMGLFGHRSGGPAKVSVFSSALMGTITGSGVANVVTTGQFTIPLMKRFG 253
           ++G+     D +    G   GGP  ++V +S LMG+++GS VAN V+TG  TIP+MK+ G
Sbjct: 206 RSGVGDYIMDVSRAAAGKVVGGPGFIAVLASGLMGSVSGSSVANTVSTGVITIPMMKKAG 265

Query: 254 YKPAFAGGVEATSSMGSQLMPPVMGAVAFIMAETINVPYAEVAKAALIPALLYFGSVYWM 313
           +   FA GVEA +S G QLMPPVMGA AFIMA    +PY ++   + IPAL+YF SV + 
Sbjct: 266 FPARFAAGVEAAASTGGQLMPPVMGAGAFIMASYTQIPYVDIVAVSFIPALIYFLSVAFF 325

Query: 314 VHLEARRSHLHGLPREQCPSAWDALRQRWFLLVPLMVLVALLFSGRTPLYSGMVGLALTA 373
           V +EA+R  +  +   Q P     L   W  L+PL VLV LL  G TP Y+   GL++ +
Sbjct: 326 VRIEAKRMGVQIVTTSQEP-FMKVLLSGWHNLIPLAVLVTLLVVGFTPTYA--AGLSILS 382

Query: 374 IVILGSAIILRAQKTWLRAAFWVALGILCSGFFRMGIGVILMVIAGLAIACCFVQGGRAT 433
           +++                A W       S   +MG   I+  +          QG +  
Sbjct: 383 VIV----------------ASWF------SKNHKMGPKAIIEALE---------QGAKNM 411

Query: 434 LHACVMALAEGARHAVPVGIACALVGVIIGVISLTGLATTFAGYILDLGRDNLFLSLVLT 493
               V+ +                +G++I VIS TG+  TF+  I +    +L   LVL 
Sbjct: 412 ATTAVLLVG---------------IGLVINVISTTGIGNTFSLMINNWANGDLLTMLVLI 456

Query: 494 MLTCLVLGMGIPTIPNYIITSSIAAPALLEL-----GVPLIVSHMFVFYFGILADLTPPV 548
            L  LVLGMG+P    YI+  +++APAL +L      V L+VS         +  L  P 
Sbjct: 457 TLASLVLGMGLPVTAAYIVLGTLSAPALYKLLAESQLVDLMVSGQLPEQAKAIFMLAAPD 516

Query: 549 ALACFAAAPIAKEK 562
            L+    AP+A EK
Sbjct: 517 QLS-LLNAPMAAEK 529