Pairwise Alignments

Query, 675 a.a., permease from Pseudomonas putida KT2440

Subject, 427 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score = 76.3 bits (186), Expect = 3e-18
 Identities = 81/395 (20%), Positives = 150/395 (37%), Gaps = 53/395 (13%)

Query: 165 FGTEGLYGTPTYVSATYIYLFILFGAFLEQAGMIRLFTDFAMGLFGHRSGGPAKVSVFSS 224
           F  + + G     +   +  F+L G  +  AG+     +FA  L GH +G    V++ +S
Sbjct: 40  FAAQQMLGGIDNFTLLAVPFFVLTGHLMNSAGITERIFNFAKSLVGHITGSLGHVNIMAS 99

Query: 225 ALMGTITGSGVANVVTTGQFTIPLMKRFGYKPAFAGGVEATSSMGSQLMPPVMGAVAFIM 284
            L   ++GS +A+    GQ  I  M+   Y   FAGG+ A S +   L+PP +  V  I 
Sbjct: 100 LLFSGMSGSALADAGGLGQLEIKSMRDAKYHDDFAGGLTAASCIIGPLVPPSVPLV--IY 157

Query: 285 AETINVPYAEVAKAALIPALLYFGSVYWMVHLEARRSHLHGLPREQCPSAWDALRQRWFL 344
               N     +  A  IP LL   ++  M +   ++     LP+      + +L++ +  
Sbjct: 158 GVVSNTSIGALFLAGAIPGLLCCIALMVMSYFICKKRGYMTLPKASRREQFKSLKEAFLS 217

Query: 345 LVPLMVLVALLFSGR-TPLYSGMVGLALTAIVILGSAIILRAQKTWLRAAFWVALGILCS 403
           L+  ++++  +FSG+ TP  +  V                                   S
Sbjct: 218 LLTPVIIIGGIFSGKFTPTEAAAV-----------------------------------S 242

Query: 404 GFFRMGIGVILMVIAGLAIACCFVQGGRATLHACVMALAEGARHAVPVGIACALVGVIIG 463
             + + +G ++                  TL   +  L E       V +    V V   
Sbjct: 243 SLYALFLGTVVY--------------NTLTLQGFIEILKETVNTTAVVALMVMGVTVFGW 288

Query: 464 VISLTGLATTFAGYILDLGRDNLFLSLVLTMLTCLVLGMGIPTIPNYIITSSIAAPALLE 523
           +++   L    A Y L +  DN  + L+L  L  L LG  I ++   ++      P    
Sbjct: 289 IVAREQLPQMLADYFLTIS-DNPLVLLLLINLLLLFLGTFIESLALLLLLVPFLVPVASA 347

Query: 524 LGVPLIVSHMFVFYFGILADLTPPVALACFAAAPI 558
           +G+  +   +      ++  LTPP+ +A +  + +
Sbjct: 348 VGIDPVHFGVMAILNLMIGILTPPMGMALYVVSRV 382