Pairwise Alignments

Query, 675 a.a., permease from Pseudomonas putida KT2440

Subject, 427 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

 Score = 63.5 bits (153), Expect = 2e-14
 Identities = 89/384 (23%), Positives = 154/384 (40%), Gaps = 62/384 (16%)

Query: 184 LFILFGAFLEQAGMIRLFTDFAMGLFGHRSGGPAKVSVFSSALMGTITGSGVANVVTTGQ 243
           LF+  G  L++  +     +    LFG   GG A  +V    L+   TG   A+VV  G 
Sbjct: 62  LFVFMGLVLQKTKLAEQLLESMGRLFGGIHGGVAISTVLVGTLLAASTGVVGASVVAMGL 121

Query: 244 FTIPLMKRFGYKPAFAGGVEATSSMGSQLMPPVMGAVAFIMAETINVPYAEVAKAALIPA 303
            ++P+M ++ Y    A G    S    Q++PP    V  ++ + + VP  ++ +AAL P 
Sbjct: 122 ISLPVMLKYRYDKGLACGTICASGTLGQIIPP--SIVLILLGDVLGVPVGDLFQAALWPG 179

Query: 304 LLYFGSVYWMVHLEARRSHLHGLPREQCPSAWDALRQRWFLLVPLMVLVALLFSGRTPLY 363
           L+   +    + + A+ +    +P E  P A  + RQ         V+ AL         
Sbjct: 180 LMLVAAYIIYILIYAKLNPQAAMPIE--PDADLSRRQE--------VVKAL--------- 220

Query: 364 SGMVGLALTAIVILGSAIILRAQKTWLRAAFWVALGILCSGFFRMGIGVILMVIAGLAIA 423
             ++      +V+LGS  I     T   +A   ALG         G G IL+ +A    +
Sbjct: 221 KAVIPPLALIVVVLGS--IFAGVATPTESA---ALG---------GAGAILLALAYGQFS 266

Query: 424 CCFV-QGGRATLHACVMALAEGARHAVPVGIACALVGVIIGVISLTGLATTFAG------ 476
              V    + T+    M  A                 +++G  + + +A T+ G      
Sbjct: 267 WSMVYDASKETVKVTAMVFA-----------------ILLGATAFS-MAFTYTGGDELVE 308

Query: 477 -YILDLGRDNLFLSLVLTMLTCLVLGMGIPTIPNYIITSSIAAPALLELGVPLIVSHMFV 535
            ++++L  D  +  L++TML  L+LG  I  +    I   I AP  + + V +    + +
Sbjct: 309 EWMMNLPGDK-WGFLIVTMLVILILGFFIDFVEICFIIVPILAPVAVLMDVDMTWFAILI 367

Query: 536 FYFGILADLTPPVALACFAAAPIA 559
                 + LTPP   + F    +A
Sbjct: 368 AMNLQTSFLTPPFGFSLFYLKGVA 391