Pairwise Alignments

Query, 675 a.a., permease from Pseudomonas putida KT2440

Subject, 597 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score = 78.6 bits (192), Expect = 8e-19
 Identities = 102/422 (24%), Positives = 168/422 (39%), Gaps = 47/422 (11%)

Query: 168 EGLYGTPTYVSATYIYLFILFGAFLEQAGMIRLFTDFAMGLFGHRSGGPAKVSVFSSALM 227
           E  +G  +  +   I  F   G  LE++GM     D    LFG   GG A   +F  AL+
Sbjct: 64  ERFWGVMSNDTLLAIPFFTFMGIVLERSGMAEDLLDTIGQLFGPVRGGLAYAVIFVGALL 123

Query: 228 GTITGSGVANVVTTGQFTIPLMKRFGYKPAFAGGVEATSSMGSQLMPPVMGAVAFIMAET 287
              TG   A+V+  G  ++P+M R+GY    A GV A S   +Q++PP +  V  ++A+ 
Sbjct: 124 AATTGVVAASVIAMGLISLPIMLRYGYDRRIASGVIAASGTLAQIIPPSL--VLIVLADQ 181

Query: 288 INVPYAEVAKAALIPAL----LYFGSVYWMVHLEARRSHLHGLPREQCPSAWDALRQRWF 343
           +     ++   ALIP L    LY G +  M  +  +R  +  LP E              
Sbjct: 182 LGRSVGDMYAGALIPGLVLTGLYMGYILLMTFV--KRHSMPALPLEARTLGSGVAS---- 235

Query: 344 LLVPLMVLVALLFSGRTPL------YSGMVGLALTAIVILGSAIILRAQKTWLRAAFWVA 397
           L + L+V  A+ ++    L       + ++G  +  I I  +A+  R  K  + A   +A
Sbjct: 236 LAIALLVACAIAYAAHVYLSPTQGENADILGATVGIIFIYLAALADRTLK--INALSRLA 293

Query: 398 LGILCSGFFRMGIGVILMVIAGLAIACCFVQGGRATLHACVMALAEGARHAVPVGIACAL 457
             ++      + +  +++    L IA     G    + A VMA  +G  +   V  A A 
Sbjct: 294 QQVIIVLIPPLALIFLVLGTIFLGIATPTEGGAMGAVGALVMAAGKGRLNMEVVRAALAS 353

Query: 458 VG-----VIIGVISLTGLATTFAGYILDLGRDNLFLS--------LVLTMLTCLVLGMGI 504
                  V+  +I     + TF G    L  ++L  +        L+   +    L   +
Sbjct: 354 TTRLSAFVLFILIGARVFSLTFYGVNGHLWVEHLLTALPGGEIGFLIAVNVLVFFLAFFL 413

Query: 505 PTIPNYIITSSIAAPALLELGVPLIVSHMFVFYFGILADLT-------PPVALACFAAAP 557
                  I   + APA  +LG+ LI       +FG+L  +        PP   A F    
Sbjct: 414 DFFELAFIIVPLLAPAADKLGIDLI-------WFGVLLGINMQTSFMHPPFGFALFYLRS 466

Query: 558 IA 559
           +A
Sbjct: 467 VA 468