Pairwise Alignments

Query, 675 a.a., permease from Pseudomonas putida KT2440

Subject, 421 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score = 85.9 bits (211), Expect = 3e-21
 Identities = 99/395 (25%), Positives = 159/395 (40%), Gaps = 54/395 (13%)

Query: 170 LYGTPTYVSATYIYLFILFGAFLEQAGMIRLFTDFAMGLFGHRSGGPAKVSVFSSALMGT 229
           L+G         I LF+L G  +   G+ R   D  M   G   GG A V++ ++  + +
Sbjct: 45  LFGGVDNYGLISIPLFVLIGEIMNGGGITRRIIDMTMAFVGAMRGGLAYVNLLANMFVAS 104

Query: 230 ITGSGVANVVTTGQFTIPLMKRFGYKPAFAGGVEATSSMGSQLMPP-VMGAVAFIMAETI 288
           I GS  A V    Q  +P M++ GY   FA G+ A S M   ++PP +M  V  ++A+  
Sbjct: 105 ILGSATAQVAVMAQMMVPEMEKKGYDKTFAAGLTAYSGMLGPIIPPSIMFVVYSVLAQ-- 162

Query: 289 NVPYAEVAKAALIPALLYFGSVYWMVHLEARRSHLHGLPREQCPSAWDALRQRWFLLVPL 348
            VP +++  A ++P +L   +   ++   A    ++  PR +     + +R         
Sbjct: 163 -VPVSDMLAAGIVPGILLTVAFCLVI---AAMGFVYNYPRGERMKLQERVR--------- 209

Query: 349 MVLVALLFSGRTPLYSGMVGLALTAIVILGSAIILRAQKTWLRAAFWVALGILCSGFFRM 408
           +VL AL                L   VI+GS +   A  T   A                
Sbjct: 210 IVLDAL-------------PTLLIPFVIVGSILSGLANATEAAA---------------- 240

Query: 409 GIGVILMVIAGLAIACCFVQGGRATLHACVMALAEGARHAVPVGIACALVGVIIGVISLT 468
            +G +  V+ G     CF  G         M L  G   AV + +  A   V   V+   
Sbjct: 241 -VGAVAAVLVG-----CFWIGELKFSDLPRMMLRAGIYSAVVLFLVAA-AAVFSWVLVYG 293

Query: 469 GLATTFAGYILDLGRDNLFLSLVLTMLTCLVLGMGIPTIPNYIITSSIAAPALLEL-GVP 527
            +    AG++  +  D +   L++ ++  LV+G  I   P  I+T  I  P   E+ G+ 
Sbjct: 294 MVPQQVAGWVQTVASDPVTFMLLVNVI-LLVIGTVIDGAPGLIMTVPILLPIATEVYGID 352

Query: 528 LIVSHMFVFYFGILADLTPPVALACFAAAPIAKEK 562
            I   + V    +L  L+PPV L  F AA +   K
Sbjct: 353 PIHFGVVVVVNLVLGFLSPPVGLCFFVAAAVTGAK 387